Closed mhoban closed 6 months ago
Allow the user to specify a glob directly using --reads. This could be easily done by checking if params.reads is a directory.
so you could do something like this:
$ eDNAFlow.nf --reads '../fastq/*{forward,reverse}*.fastq'
There might be issues with ordering of forwards & reverses in this case, since it's done alphabetically, but we can burn that bridge when we come to it.
Actually, let's not do this
mhoban
commented
6 months ago
Allow the user to specify a glob directly using --reads. This could be easily done by checking if params.reads is a directory.
so you could do something like this:
There might be issues with ordering of forwards & reverses in this case, since it's done alphabetically, but we can burn that bridge when we come to it.