==> Rcpp::compileAttributes()
* Updated R/RcppExports.R
==> Rcmd.exe INSTALL --preclean --no-multiarch --with-keep.source Explore
* installing to library 'C:/R/R-4.2.1/library'
* installing *source* package 'Explore' ...
** using staged installation
** libs
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ExploreInterface.cpp -o ExploreInterface.o
ExploreInterface.cpp: In function 'void runExplore(Rcpp::CharacterVector)':
ExploreInterface.cpp:28:7: warning: unused variable 'res' [-Wunused-variable]
28 | int res = main(argc, argv);
| ^~~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/common.cpp -o C++/common.o
C++/common.cpp: In function 'std::string PrintOperator(OPERATOR)':
C++/common.cpp:54:10: warning: enumeration value 'NONE' not handled in switch [-Wswitch]
54 | switch (Operator) {
| ^
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/IOExplore/IOExplore.cpp -o C++/IOExplore/IOExplore.o
C++/IOExplore/IOExplore.cpp: In member function 'bool IOExplore::ReadArffDataFile()':
C++/IOExplore/IOExplore.cpp:289:18: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
289 | for (int i=0; i<strlen(MyToken); i++) //Uppercase Token
| ~^~~~~~~~~~~~~~~~
C++/IOExplore/IOExplore.cpp:298:36: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
298 | FeatureName = str_parse(&Dummy," \t");
| ^~~~~
C++/IOExplore/IOExplore.cpp:299:36: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
299 | FeatureType = str_parse(&Dummy," \t");
| ^~~~~
C++/IOExplore/IOExplore.cpp:300:21: warning: comparison of integer expressions of different signedness: 'int' and 'size_t' {aka 'long long unsigned int'} [-Wsign-compare]
300 | for (int i=0; (i<strlen(FeatureType)) && FeatureType; i++) //Uppercase Token
| ~^~~~~~~~~~~~~~~~~~~~
C++/IOExplore/IOExplore.cpp:334:31: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
334 | MyToken = str_parse(&Dummy,",");
| ^~~
C++/IOExplore/IOExplore.cpp:342:36: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
342 | MyToken = str_parse(&Dummy,",");
| ^~~
C++/IOExplore/IOExplore.cpp:270:15: warning: unused variable 'Class' [-Wunused-variable]
270 | unsigned int Class;
| ^~~~~
C++/IOExplore/IOExplore.cpp: In member function 'void IOExplore::SavePartitionFile(std::string, PARTITION_TYPE, unsigned int)':
C++/IOExplore/IOExplore.cpp:411:42: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
411 | string newfilename = str_parse(&dummy,".");
| ^~~
C++/IOExplore/IOExplore.cpp: In member function 'bool IOExplore::SaveExploreToProject(std::string)':
C++/IOExplore/IOExplore.cpp:452:9: warning: enumeration value 'LEAVE_ONE_OUT' not handled in switch [-Wswitch]
452 | switch (Project->GetPartitionMethod()){
| ^
C++/IOExplore/IOExplore.cpp:551:14: warning: enumeration value 'EQUAL' not handled in switch [-Wswitch]
551 | switch (Project->GetOperator(i)){
| ^
C++/IOExplore/IOExplore.cpp: In member function 'bool IOExplore::SaveSettingsToFile(std::string)':
C++/IOExplore/IOExplore.cpp:744:12: warning: enumeration value 'LEAVE_ONE_OUT' not handled in switch [-Wswitch]
744 | switch (ProjectSettings.PartitionMethod) {
| ^
C++/IOExplore/IOExplore.cpp:824:14: warning: enumeration value 'EQUAL' not handled in switch [-Wswitch]
824 | switch ((*CurrentRestriction).Operator) {
| ^
C++/IOExplore/IOExplore.cpp:726:8: warning: unused variable 'Buffer' [-Wunused-variable]
726 | char Buffer[MAX_LINESIZE];
| ^~~~~~
C++/IOExplore/IOExplore.cpp: In member function 'bool IOExplore::SetupExploreFromProject(std::string)':
C++/IOExplore/IOExplore.cpp:1031:30: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
1031 | MyToken = str_parse(&Dummy,"=");
| ^~~
C++/IOExplore/IOExplore.cpp:1039:32: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
1039 | MyToken = str_parse(&Dummy,"=");
| ^~~
C++/IOExplore/IOExplore.cpp:1213:43: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
1213 | MyToken = str_parse(&FeatureRestriction,";");
| ^~~
C++/IOExplore/IOExplore.cpp:1216:45: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
1216 | MyToken = str_parse(&FeatureRestriction,";");
| ^~~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/bin.cpp -o C++/Explore/bin.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/candidate.cpp -o C++/Explore/candidate.o
C++/Explore/candidate.cpp: In member function 'bool CANDIDATE::InterpretCombinations(std::string)':
C++/Explore/candidate.cpp:481:8: warning: unused variable 'Buffer' [-Wunused-variable]
481 | char Buffer[MAX_LINESIZE];
| ^~~~~~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/classdef.cpp -o C++/Explore/classdef.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/condition.cpp -o C++/Explore/condition.o
C++/Explore/condition.cpp: In constructor 'CONDITION::CONDITION(unsigned int, std::string, std::vector<CUTOFF>, OPERATOR, unsigned int)':
C++/Explore/condition.cpp:47:18: warning: converting to non-pointer type 'unsigned int' from NULL [-Wconversion-null]
47 | CutoffNumber = NULL;
| ^~~~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/conjunction.cpp -o C++/Explore/conjunction.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/constraint.cpp -o C++/Explore/constraint.o
C++/Explore/constraint.cpp: In constructor 'CONSTRAINT::CONSTRAINT()':
C++/Explore/constraint.cpp:11:11: warning: converting to non-pointer type 'float' from NULL [-Wconversion-null]
11 | Value = NULL;
| ^~~~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/cutoff.cpp -o C++/Explore/cutoff.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/explore.cpp -o C++/Explore/explore.o
C++/Explore/explore.cpp: In member function 'double Explore::RuleComplexity()':
C++/Explore/explore.cpp:110:12: warning: enumeration value 'LEAVE_ONE_OUT' not handled in switch [-Wswitch]
110 | switch (PartitionMethod) {
| ^
C++/Explore/explore.cpp: In member function 'void Explore::PrintSettings()':
C++/Explore/explore.cpp:661:16: warning: unused variable 'Selected' [-Wunused-variable]
661 | unsigned int Selected;
| ^~~~~~~~
C++/Explore/explore.cpp: In member function 'void Explore::Resume()':
C++/Explore/explore.cpp:2625:10: warning: unused variable 'dummy' [-Wunused-variable]
2625 | time_t dummy;
| ^~~~~
C++/Explore/explore.cpp: In member function 'bool Explore::RunProject()':
C++/Explore/explore.cpp:2849:16: warning: unused variable 'BreatheCount' [-Wunused-variable]
2849 | unsigned int BreatheCount = 0;
| ^~~~~~~~~~~~
C++/Explore/explore.cpp:2851:10: warning: unused variable 'dummy' [-Wunused-variable]
2851 | time_t dummy;
| ^~~~~
C++/Explore/explore.cpp:2852:16: warning: unused variable 'ActiveRuleLength' [-Wunused-variable]
2852 | unsigned int ActiveRuleLength;
| ^~~~~~~~~~~~~~~~
C++/Explore/explore.cpp: In member function 'void Explore::Induce(int, int)':
C++/Explore/explore.cpp:3374:16: warning: unused variable 'BreatheCount' [-Wunused-variable]
3374 | unsigned int BreatheCount = 0;
| ^~~~~~~~~~~~
C++/Explore/explore.cpp: In member function 'bool Explore::ResumeProject()':
C++/Explore/explore.cpp:3453:16: warning: unused variable 'BreatheCount' [-Wunused-variable]
3453 | unsigned int BreatheCount = 0;
| ^~~~~~~~~~~~
C++/Explore/explore.cpp: In member function 'void Explore::PrintSummary()':
C++/Explore/explore.cpp:3765:8: warning: variable 'CombinationsLongDone' set but not used [-Wunused-but-set-variable]
3765 | long CombinationsLongDone, FeatureSetsLongDone, CutoffSetsLongDone;
| ^~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp:3765:30: warning: variable 'FeatureSetsLongDone' set but not used [-Wunused-but-set-variable]
3765 | long CombinationsLongDone, FeatureSetsLongDone, CutoffSetsLongDone;
| ^~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp:3765:51: warning: variable 'CutoffSetsLongDone' set but not used [-Wunused-but-set-variable]
3765 | long CombinationsLongDone, FeatureSetsLongDone, CutoffSetsLongDone;
| ^~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp:3766:8: warning: variable 'CombinationsLongTotal' set but not used [-Wunused-but-set-variable]
3766 | long CombinationsLongTotal, FeatureSetsLongTotal;
| ^~~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp:3766:31: warning: variable 'FeatureSetsLongTotal' set but not used [-Wunused-but-set-variable]
3766 | long CombinationsLongTotal, FeatureSetsLongTotal;
| ^~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp:3767:16: warning: variable 'PartitionsDone' set but not used [-Wunused-but-set-variable]
3767 | unsigned int PartitionsDone, PartitionsTotal;
| ^~~~~~~~~~~~~~
C++/Explore/explore.cpp:3767:32: warning: unused variable 'PartitionsTotal' [-Wunused-variable]
3767 | unsigned int PartitionsDone, PartitionsTotal;
| ^~~~~~~~~~~~~~~
C++/Explore/explore.cpp:3768:10: warning: variable 'RulesTotalLimit' set but not used [-Wunused-but-set-variable]
3768 | double RulesTotalLimit;
| ^~~~~~~~~~~~~~~
C++/Explore/explore.cpp: In member function 'void Explore::SavePartitionFile(std::string, PARTITION_TYPE, unsigned int)':
C++/Explore/explore.cpp:3854:42: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings]
3854 | string newfilename = str_parse(&dummy,".");
| ^~~
C++/Explore/explore.cpp: In member function 'void Explore::Induce(int, int)':
C++/Explore/explore.cpp:3407:28: warning: 'CandidatePerformance' may be used uninitialized in this function [-Wmaybe-uninitialized]
3407 | if (Rule.TestRule(Initialised, Constraints,
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
3408 | CandidatePerformance, MaximizeMeasure, RestrictionSet,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3409 | RuleOutputMethod, IsPrintPerformance, IsPrintSets)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp: In member function 'void Explore::SummarisePerformance()':
C++/Explore/explore.cpp:425:22: warning: 'CurrentValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
425 | OverallPerformance += CurrentValue;
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
C++/Explore/explore.cpp: In function 'Explore::RunProject()::<lambda(tbb::blocked_range<int>)>::<lambda(tbb::blocked_range<int>)>':
C++/Explore/explore.cpp:3228:37: warning: 'change' may be used uninitialized in this function [-Wmaybe-uninitialized]
3228 | if (change) {
| ^~
C++/Explore/explore.cpp:3195:53: warning: 'CandidatePerformance' may be used uninitialized in this function [-Wmaybe-uninitialized]
3195 | if (Rule_ij.TestRule(Initialised, Constraints,
| ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
3196 | CandidatePerformance, MaximizeMeasure, RestrictionSet,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3197 | RuleOutputMethod, IsPrintPerformance, IsPrintSets)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp: In function 'Explore::RunProject()::<lambda(tbb::blocked_range<int>)>':
C++/Explore/explore.cpp:3072:29: warning: 'change' may be used uninitialized in this function [-Wmaybe-uninitialized]
3072 | if (change) {
| ^~
C++/Explore/explore.cpp:3039:44: warning: 'CandidatePerformance' may be used uninitialized in this function [-Wmaybe-uninitialized]
3039 | if (Rule_i.TestRule(Initialised, Constraints,
| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
3040 | CandidatePerformance, MaximizeMeasure, RestrictionSet,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
3041 | RuleOutputMethod, IsPrintPerformance, IsPrintSets)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp: In member function 'bool Explore::RunProject()':
C++/Explore/explore.cpp:2927:34: warning: 'CandidatePerformance' may be used uninitialized in this function [-Wmaybe-uninitialized]
2927 | if (Rule.TestRule(Initialised, Constraints,
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
2928 | CandidatePerformance, MaximizeMeasure, RestrictionSet,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2929 | RuleOutputMethod, IsPrintPerformance, IsPrintSets)) {
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp: In member function 'bool Explore::ResumeProject()':
C++/Explore/explore.cpp:3543:24: warning: 'CandidatePerformance' may be used uninitialized in this function [-Wmaybe-uninitialized]
3543 | Rule.TestRule(Initialised, Constraints, CandidatePerformance, MaximizeMeasure, RestrictionSet, RuleOutputMethod, IsPrintPerformance, IsPrintSets);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/explore.cpp:3485:24: warning: 'CandidatePerformance' may be used uninitialized in this function [-Wmaybe-uninitialized]
3485 | Rule.TestRule(Initialised, Constraints, CandidatePerformance, MaximizeMeasure, RestrictionSet, RuleOutputMethod, IsPrintPerformance, IsPrintSets);
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/feature.cpp -o C++/Explore/feature.o
C++/Explore/feature.cpp: In member function 'void FEATURE::ROCDiagonalOperator()':
C++/Explore/feature.cpp:811:11: warning: unused variable 'ROCDiagonal' [-Wunused-variable]
811 | float ROCDiagonal, Sensitivity, FPF;
| ^~~~~~~~~~~
C++/Explore/feature.cpp: In member function 'void FEATURE::InitialiseRanges()':
C++/Explore/feature.cpp:1224:13: warning: 'InRange' may be used uninitialized in this function [-Wmaybe-uninitialized]
1224 | if (!InRange) {
| ^~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/mandatory.cpp -o C++/Explore/mandatory.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/observation.cpp -o C++/Explore/observation.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/partition.cpp -o C++/Explore/partition.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/performance.cpp -o C++/Explore/performance.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/population.cpp -o C++/Explore/population.o
C++/Explore/population.cpp: In member function 'void POPULATION::PrintSettings()':
C++/Explore/population.cpp:326:10: warning: enumeration value 'LEAVE_ONE_OUT' not handled in switch [-Wswitch]
326 | switch (*PartitionMethod) {
| ^
C++/Explore/population.cpp: In member function 'void POPULATION::PrintPartitions()':
C++/Explore/population.cpp:457:9: warning: unused variable 'Type' [-Wunused-variable]
457 | char* Type;
| ^~~~
C++/Explore/population.cpp: In member function 'unsigned int POPULATION::GetRandomNumber(unsigned int)':
C++/Explore/population.cpp:656:10: warning: unused variable 'FloatingPoint' [-Wunused-variable]
656 | double FloatingPoint; // Needed to generator a random number
| ^~~~~~~~~~~~~
C++/Explore/population.cpp: In member function 'void POPULATION::InitialisePartitions()':
C++/Explore/population.cpp:1129:16: warning: unused variable 'CurrentClass' [-Wunused-variable]
1129 | unsigned int CurrentClass, PartitionSize, Order;
| ^~~~~~~~~~~~
C++/Explore/population.cpp:1137:12: warning: unused variable 'TempClass' [-Wunused-variable]
1137 | CLASSES* TempClass;
| ^~~~~~~~~
C++/Explore/population.cpp: In member function 'void POPULATION::Stratify()':
C++/Explore/population.cpp:1189:28: warning: unused variable 'no' [-Wunused-variable]
1189 | unsigned int Class,Order,no;
| ^~
C++/Explore/population.cpp: In member function 'bool POPULATION::Holdout()':
C++/Explore/population.cpp:1331:32: warning: unused variable 'UpperBound' [-Wunused-variable]
1331 | unsigned int RandomNumber, UpperBound, NoClassObs, PartitionSize;
| ^~~~~~~~~~
C++/Explore/population.cpp: In member function 'bool POPULATION::CrossValidate()':
C++/Explore/population.cpp:1464:15: warning: unused variable 'UpperBound' [-Wunused-variable]
1464 | unsigned int UpperBound, NoClassObs;
| ^~~~~~~~~~
C++/Explore/population.cpp: In member function 'void POPULATION::ResetTestPartitions()':
C++/Explore/population.cpp:1614:9: warning: statement has no effect [-Wunused-value]
1614 | for (CurrentPartition; CurrentPartition != LastPartition; CurrentPartition++) {
| ^~~~~~~~~~~~~~~~
C++/Explore/population.cpp: In member function 'bool POPULATION::Partition()':
C++/Explore/population.cpp:1070:3: warning: 'Result' may be used uninitialized in this function [-Wmaybe-uninitialized]
1070 | if (Result) {
| ^~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/roc.cpp -o C++/Explore/roc.o
C++/Explore/roc.cpp: In member function 'void ROC::AddEntry(double, double)':
C++/Explore/roc.cpp:49:10: warning: unused variable 'MaxValue' [-Wunused-variable]
49 | double MaxValue;
| ^~~~~~~~
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/rocpair.cpp -o C++/Explore/rocpair.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/rule.cpp -o C++/Explore/rule.o
C++/Explore/rule.cpp: In constructor 'RULE::RULE()':
C++/Explore/rule.cpp:43:21: warning: converting to non-pointer type 'unsigned int' from NULL [-Wconversion-null]
43 | CurrentLength = NULL;
| ^~~~
C++/Explore/rule.cpp:44:17: warning: converting to non-pointer type 'unsigned int' from NULL [-Wconversion-null]
44 | MinLength = NULL;
| ^~~~
C++/Explore/rule.cpp:45:17: warning: converting to non-pointer type 'unsigned int' from NULL [-Wconversion-null]
45 | MaxLength = NULL;
| ^~~~
C++/Explore/rule.cpp: In member function 'double RULE::RuleComplexity(unsigned int)':
C++/Explore/rule.cpp:795:12: warning: unused variable 'FeatureSetComplexity' [-Wunused-variable]
795 | double FeatureSetComplexity=0;
| ^~~~~~~~~~~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::StartRuleLength(int)':
C++/Explore/rule.cpp:1608:10: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
1608 | if (i<=MaxLength) { // Create first combination for next rulelength
| ~^~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::NextFeatureSet(int, int)':
C++/Explore/rule.cpp:1700:79: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
1700 | if (Conjunctions[i].Conditions[0].FeatureOperator ==
C++/Explore/rule.cpp:1717:33: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<CONJUNCTION>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
1717 | if (Left<(Conjunctions.size()-1-ConjunctionNr)){
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/rule.cpp:1754:36: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<CUTOFF>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
1754 | if (NumRepeats < Conjunctions[ConjunctionNr - 1].Conditions[0].Cutoffs.size() - 1) {
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/rule.cpp:1774:33: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
1774 | if (FOperatorNr > NoFeatureOperators) {
| ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
C++/Explore/rule.cpp:1826:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<CUTOFF>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
1826 | if (NumRepeats < Conjunctions[ConjunctionNr-1].Conditions[ConditionNr].Cutoffs.size()-1){
| ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
C++/Explore/rule.cpp:1642:9: warning: unused variable 'ConjunctionSize' [-Wunused-variable]
1642 | int ConjunctionSize, ConjunctionNr, ConditionNr, FOperatorNr, MaxFOperator;
| ^~~~~~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::NextCandidateCutoffSet_Rule(PERFORMANCE_MEASURE)':
C++/Explore/rule.cpp:2186:43: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<CONJUNCTION>::size_type' {aka 'long long unsigned int'} [-Wsign-compare]
2186 | for (ConjunctionNo=0;ConjunctionNo<Conjunctions.size();ConjunctionNo++) {
| ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::NextCandidateCutoffSet_Conjunction(int, PERFORMANCE_MEASURE, bool)':
C++/Explore/rule.cpp:2271:25: warning: unused variable 'r' [-Wunused-variable]
2271 | int r=Conjunctions.size();
| ^
C++/Explore/rule.cpp:2238:9: warning: unused variable 'ConditionNo' [-Wunused-variable]
2238 | int ConditionNo;
| ^~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::CheckStopFeature(CANDIDATE)':
C++/Explore/rule.cpp:2803:18: warning: unused variable 'CurrentCondition' [-Wunused-variable]
2803 | CONDITION* CurrentCondition;
| ^~~~~~~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::MatchConjunctionCutoffSet(unsigned int, unsigned int)':
C++/Explore/rule.cpp:2983:12: warning: unused variable 'Precision' [-Wunused-variable]
2983 | double Precision = 1e-6;
| ^~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::TestRule(bool, std::vector<CONSTRAINT>, float, PERFORMANCE_MEASURE, bool, RULE_OUTPUT_METHOD, bool, bool)':
C++/Explore/rule.cpp:3217:12: warning: enumeration value 'BEST' not handled in switch [-Wswitch]
3217 | switch (RuleOutputMethod) {
| ^
C++/Explore/rule.cpp:3188:10: warning: variable 'Candidate' set but not used [-Wunused-but-set-variable]
3188 | bool Candidate = false;
| ^~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::CompareConstraints(PERFORMANCE, bool, std::vector<CONSTRAINT>)':
C++/Explore/rule.cpp:3272:24: warning: enumeration value 'BALANCEDACCURACY' not handled in switch [-Wswitch]
3272 | switch ((*CurrentConstraint).Measure) {
| ^
C++/Explore/rule.cpp:3272:24: warning: enumeration value 'F1SCORE' not handled in switch [-Wswitch]
C++/Explore/rule.cpp: In member function 'bool RULE::NextCutoffSet()':
C++/Explore/rule.cpp:2135:93: warning: 'PreviousCondition' may be used uninitialized in this function [-Wmaybe-uninitialized]
2135 | CurrentCondition->CutoffNumber = PreviousCondition->CutoffNumber;
| ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'void RULE::SetTestMode(PARTITION_TYPE)':
C++/Explore/rule.cpp:2575:43: warning: 'PartitionClasses' may be used uninitialized in this function [-Wmaybe-uninitialized]
2575 | FeatureOperators[j].InitialiseSets(PartitionClasses);
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::TestRule(bool, std::vector<CONSTRAINT>, float, PERFORMANCE_MEASURE, bool, RULE_OUTPUT_METHOD, bool, bool)':
C++/Explore/rule.cpp:3356:9: warning: 'RuleValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
3356 | if (CandidateValue<=RuleValue) { // TODO: why = included here?
| ^~
C++/Explore/rule.cpp:3327:15: note: 'RuleValue' was declared here
3327 | float RuleValue;
| ^~~~~~~~~
C++/Explore/rule.cpp:3289:17: warning: 'RuleValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
3289 | if (ConstraintValue > RuleValue) {
| ^~
C++/Explore/rule.cpp:3268:15: note: 'RuleValue' was declared here
3268 | float RuleValue,ConstraintValue;
| ^~~~~~~~~
C++/Explore/rule.cpp: In member function 'bool RULE::CompareConstraints(PERFORMANCE, bool, std::vector<CONSTRAINT>)':
C++/Explore/rule.cpp:3289:17: warning: 'RuleValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
3289 | if (ConstraintValue > RuleValue) {
| ^~
C++/Explore/rule.cpp: In member function 'bool RULE::CompareBestCandidate(PERFORMANCE, bool, float, PERFORMANCE_MEASURE)':
C++/Explore/rule.cpp:3356:9: warning: 'RuleValue' may be used uninitialized in this function [-Wmaybe-uninitialized]
3356 | if (CandidateValue<=RuleValue) { // TODO: why = included here?
| ^~
C++/Explore/rule.cpp: In member function 'int RULE::FindBestLength(bool, CANDIDATE, PARTITION_METHOD, PERFORMANCE_MEASURE)':
C++/Explore/rule.cpp:3495:29: warning: 'current' may be used uninitialized in this function [-Wmaybe-uninitialized]
3495 | if (current > best) {
| ^~
C++/Explore/rule.cpp:3495:29: warning: 'best' may be used uninitialized in this function [-Wmaybe-uninitialized]
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/set.cpp -o C++/Explore/set.o
g++ -std=gnu++11 -I"C:/R/R-4.2.1/include" -DNDEBUG -I'C:/R/R-4.2.1/library/Rcpp/include' -I'C:/R/R-4.2.1/library/BH/include' -I'C:/R/R-4.2.1/library/RcppParallel/include' -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -DRCPP_PARALLEL_USE_TBB=1 -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c C++/Explore/timing.cpp -o C++/Explore/timing.o
C++/Explore/timing.cpp: In member function 'std::string TIMING::PrintAll()':
C++/Explore/timing.cpp:93:16: warning: variable 'DescriptionPads' set but not used [-Wunused-but-set-variable]
93 | unsigned int DescriptionPads;
| ^~~~~~~~~~~~~~~
C++/Explore/timing.cpp: In member function 'std::string TIMING::PrintLast()':
C++/Explore/timing.cpp:142:16: warning: variable 'DescriptionPads' set but not used [-Wunused-but-set-variable]
142 | unsigned int DescriptionPads;
| ^~~~~~~~~~~~~~~
g++ -std=gnu++11 -shared -s -static-libgcc -o Explore.dll tmp.def ExploreInterface.o RcppExports.o C++/common.o C++/IOExplore/IOExplore.o C++/Explore/bin.o C++/Explore/candidate.o C++/Explore/classdef.o C++/Explore/condition.o C++/Explore/conjunction.o C++/Explore/constraint.o C++/Explore/cutoff.o C++/Explore/explore.o C++/Explore/feature.o C++/Explore/mandatory.o C++/Explore/observation.o C++/Explore/partition.o C++/Explore/performance.o C++/Explore/population.o C++/Explore/roc.o C++/Explore/rocpair.o C++/Explore/rule.o C++/Explore/set.o C++/Explore/timing.o -LC:/R/R-4.2.1/library/RcppParallel/lib/x64 -ltbb -ltbbmalloc -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LC:/R/R-4.2.1/bin/x64 -lR
installing to C:/R/R-4.2.1/library/00LOCK-Explore/00new/Explore/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for 'Explore' in inDL(x, as.logical(local), as.logical(now), ...):
unable to load shared object 'C:/R/R-4.2.1/library/00LOCK-Explore/00new/Explore/libs/x64/Explore.dll':
LoadLibrary failure: The specified module could not be found.
Error: loading failed
Execution halted
ERROR: loading failed
* removing 'C:/R/R-4.2.1/library/Explore'
Exited with status 1.
cebarboza
commented
1 year ago