mibig-secmet / mibig-json

Repository to track changes in MIBiG curation data stored in JSON format
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Error with BGC0000001 #252

Open Sam-Will opened 1 year ago

Sam-Will commented 1 year ago

Affected BGC: BGC0000001

The gene for the diels alderase enzyme AbyU is not present in MiBIG despite being annotated by antismash in the orginal BGC. AbyU is a cyclase enzyme vital for the production of abyssomicin. It's located between AbyK and AbyI, the antiSMASH database has annotated it on the genome of Verrucosispora maris AB-18-032 which is where the BGC was taken from (https://antismash-db.secondarymetabolites.org/output/GCF_000204155.1/index.html#r1c6)

Diels alderase reference: https://pubmed.ncbi.nlm.nih.gov/27140661/