mibig-secmet / mibig-json

Repository to track changes in MIBiG curation data stored in JSON format
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Error with BGC0000945 #353

Open SJShaw opened 4 months ago

SJShaw commented 4 months ago

The entry should be an NRP, rather than "Other". It should also be incomplete as the only core gene (vibF) is missing most of the domains that are required.

BGC0002494 is a better version of vibriobactin, however it is also incomplete, missing vibF entirely.

According to the reference for BGC0002494:

The late steps in vibriobactin biosynthesis, in which dihydroxybenzoate, threonine, and norspermidine are joined to each other, are not well understood, but at least four proteins, VibD, VibE, VibF, and VibH, are required for this process.

This entry should likely be retired, rather than trying to correct the above.