michaelkyu / PlasX

PlasX, a machine learning classifier for identifying plasmid sequences based on genetic architecture
GNU General Public License v3.0
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plasx cannot setup denovo gene family #9

Open JiabaoYuuuuu opened 5 months ago

JiabaoYuuuuu commented 5 months ago

plasx setup \ --de-novo-families 'https://zenodo.org/record/5819401/files/PlasX_mmseqs_profiles.tar.gz' \ --coefficients 'https://zenodo.org/record/5819401/files/PlasX_coefficients_and_gene_enrichments.txt.gz'

I couldn't download the PlasX_mmseqs_profiles.tar.gz file using this command (network issues), so I tried to install them manually, but plasx setup can only be downloaded over the network. Is there any good solution?