Implement preprocessing rules - Githubissues

michaelschaub / calcium-imaging-analysis

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Implement preprocessing rules #104

Open Joloco109 opened 1 year ago

Joloco109 commented 1 year ago

Implement a rules for preprocessing of raw data using Joao's wfield package[^1]. This should include:

[ ] - motion correction
[x] #149
[ ] - optional hemodynamic correction [^1]: Couto, J., Musall, S., Sun, X.R. et al. Chronic, cortex-wide imaging of specific cell populations during behavior. Nat Protoc 16, 3241–3263 (2021)