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michel-mata / cNODE.jl

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【p.csv】 #1

Closed linlin0026 closed 2 years ago

linlin0026 commented 2 years ago

Dear Professor, I learned your article and want to use it for my microbial data analysis, but I didn't find the example p.csv mentioned in the supplementary file. I'm not quite sure about its row arrangement, could you please add it? I will be very grateful. Meanwhile, I found the corresponding ID in the S4.3 In-vivo soil microbiome is 2104, not 2140.

michel-mata commented 2 years ago

Hi @linlin0026 , thank you for your comments!

This repository contains the package for general usage, so there is no data here. In this repository you will find the data for reproducing the paper. E.g., Data/Experimental/Drosophila_Gut/P.csv

In all the files we assume that the columns represent a local community, while the rows represent different taxa. So that 100 assemblages from a pool of 10 species would be a dataset of size 10x100.

linlin0026 commented 2 years ago

Thanks for your help~