micom-dev / micom

Python package to study microbial communities using metabolic modeling.
https://micom-dev.github.io/micom
Apache License 2.0
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Adding coupling constraint to a coupling model #91

Closed Ilhem36 closed 1 year ago

Ilhem36 commented 1 year ago

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Hello , I want to know if the microbial model generated by MICOM takes automatically into account the coupling of microbial reaction with their biomass reactions ? I want to To enforce that flux through a microbial reaction only occurs when its biomass reaction has a non-zero value, by including coupling constraints. But I don't see how can I loop over all microbial reaction to couple each of them with the biomass reactions. Do you have any idea please?