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micom-dev / q2-micom

A Qiime plugin for MICOM.
https://micom-dev.github.io/q2-micom
Apache License 2.0
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update on CarvMe database #6

Closed Mechah closed 3 years ago

Mechah commented 4 years ago

Hi! I saw that the CarvMe database is now available, but the western_diet_gut.qza is only compatible with AGORA. So does this mean I can make a model based on CarvMe, but I cannot run qiime micom grow and any downstream analysis? Thanks for clarifications!

cdiener commented 4 years ago

Yes that is unfortunately true. I am currently working on growth media/diets though to make it easier to design your own and provide more options as well.

cdiener commented 3 years ago

Sorry for the delay on this, but just as a heads-up, new media (also for CarveME) will be released the coming week.

cdiener commented 3 years ago

That took much longer but the medium can now be found in the media repo.

Mechah commented 3 years ago

Awesome thanks! :-)

Am So., 31. Jan. 2021 um 01:18 Uhr schrieb Christian Diener < notifications@github.com>:

That took much longer but the medium can now be found in the media repo https://github.com/micom-dev/media.

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