microbial-pangenomes-lab / microGWAS

Bacterial GWAS analysis
https://microgwas.readthedocs.io
MIT License
32 stars 1 forks source link

Testing fixes #16

Closed mgalardini closed 5 months ago

mgalardini commented 6 months ago

Some more changes added during testing, namely:

mgalardini commented 5 months ago

I've run the full test on a clean repository, and it completed in 65m21.817s, which is not that bad! If we can manage to use a much smaller database for eggnogg we would have an even better test