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microbialphenotypes / OMP-ontology

This repository contains the editors's working copy of OMP and public release files.
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Create subsets in OMP for terms not be used for annotation #231

Closed dsiegele closed 6 years ago

dsiegele commented 6 years ago

Follow FYPO practice described at: https://github.com/pombase/canto/issues/1411

[This term should not be used for direct manual annotation; it may, however, be used for mapping to external vocabularies in order to create electronic annotations.

We will also use similar subsets for phenotype terms where the terms should not be used for direct annotation.

in FYPO: subsetdef: qc_do_not_annotate "Term not to be used for direct annotation" subsetdef: qc_do_not_manually_annotate "Term not to be used for direct manual annotation"

in GO: subsetdef: gocheck_do_not_annotate "Term not to be used for direct annotation" subsetdef: gocheck_do_not_manually_annotate "Term not to be used for direct manual annotation"

In these cases the "proceed" button should not be visible and a message should say "This term should not be used for direct annotations, please select a child term"]

dsiegele commented 6 years ago

Edited terms in the Subset Manager of OBO-Edit. For "Term not to be used for direct annotation," changed subset name to qc_do_not_annotate For "Term not to be used for direct manual annotation," changed subset name to qc_do_not_manually_annotate