microbiome / mia

Microbiome analysis
https://microbiome.github.io/mia/
Artistic License 2.0
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mergeSEs: improve #357

Open TuomasBorman opened 1 year ago

TuomasBorman commented 1 year ago

Add parallelization to the method. Also, add option for choosing whether to combine colData columns even though their classes differ

Currently, the method checks if equally named columns have same class --> if not, do not merge. (There could be an option that allows method to merge columns even though they have different class)

antagomir commented 1 year ago

Also consider renaming mergeSEs -> combineSEs since now we are also using merge for row/col agglomeration.