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microbiome
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miaTime
Microbiome time series analysis
https://microbiome.github.io/miaTime/
Artistic License 2.0
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refactor getBaselineDivergence/getStepwiseDivergence
#91
Daenarys8
opened
1 week ago
2
add ts measures
#90
Daenarys8
opened
1 month ago
0
Auto-correlation
#89
TuomasBorman
opened
1 month ago
1
Harmonize documentation
#88
Daenarys8
closed
1 month ago
0
Update contributors list miaTime #601
#87
ake123
opened
2 months ago
0
seqtime functionality
#86
antagomir
opened
2 months ago
0
Add Rworkflows
#85
Daenarys8
closed
3 months ago
0
Add dev
#84
Daenarys8
closed
2 months ago
0
Conditionally & persistently rare taxa
#83
antagomir
opened
4 months ago
2
Replace estimateDivergence with addDivergence
#82
thpralas
closed
1 week ago
1
Explore connections with MicrobiomeStat
#81
antagomir
opened
1 year ago
0
Rename agglomerateByRank
#80
Daenarys8
closed
3 months ago
2
update transformCounts to transformAssay
#79
ake123
closed
2 months ago
1
fixed exprs_values
#78
antagomir
closed
1 year ago
0
Remove SEtools dependency
#77
TuomasBorman
closed
1 year ago
0
SEtools dependency
#76
TuomasBorman
closed
2 months ago
3
Harmonize dataset load command
#75
Daenarys8
closed
1 year ago
1
sync
#74
antagomir
closed
1 year ago
0
assay_name switch
#73
antagomir
closed
1 year ago
1
Unable to install package
#72
mariamaseng
closed
1 year ago
2
adding altExp+reduceDim support
#71
ChouaibB
closed
1 year ago
0
Issue 64
#70
ChouaibB
closed
1 year ago
0
Duplicates handling in miaTime
#69
ChouaibB
opened
1 year ago
1
Stepwise divergence
#68
antagomir
closed
1 year ago
1
Assess the ability to utilize TimeSeriesExperiment class
#67
antagomir
closed
1 year ago
2
Distance method at getStepwiseDivergence
#66
ChouaibB
closed
1 year ago
1
Add altExp support
#65
antagomir
closed
1 year ago
0
getStepwiseDivergence extension to altExp/reducedDims
#64
antagomir
closed
1 year ago
4
Stability methods
#63
antagomir
opened
1 year ago
0
Features for temporal microbiota analysis
#62
antagomir
opened
1 year ago
0
Visualization on time series, with boxplots, and points connected per subject
#61
antagomir
closed
1 year ago
1
add logo
#60
TuomasBorman
closed
1 year ago
1
Update minimalgut data reference
#59
antagomir
closed
1 year ago
1
Optimize getBaselineDivergence
#58
antagomir
opened
2 years ago
0
Vignette
#57
antagomir
closed
2 years ago
0
try update R
#56
antagomir
closed
2 years ago
0
testing website
#55
antagomir
closed
2 years ago
0
Add SilvermanAGutData
#54
TuomasBorman
closed
2 years ago
2
added tidySE
#53
antagomir
closed
2 years ago
0
vignette improvements
#52
antagomir
closed
2 years ago
0
zoo pkg added to Suggests
#51
antagomir
closed
2 years ago
0
Vignette
#50
antagomir
closed
2 years ago
0
Rethink divergence
#49
antagomir
opened
2 years ago
0
Added example on time sorting
#48
antagomir
closed
2 years ago
0
Example on mean rank shift
#47
antagomir
opened
2 years ago
0
Vignette reorganized
#46
antagomir
closed
2 years ago
0
ok
#45
antagomir
closed
2 years ago
0
articles
#44
antagomir
closed
2 years ago
0
vignette split
#43
antagomir
closed
2 years ago
0
Baselinedivergence
#42
antagomir
closed
2 years ago
0
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