microbiomeDB / microbiomeData

An R package containing all of the curated datasets from MicrobiomeDB.org
https://microbiomedb.github.io/microbiomeData/
Apache License 2.0
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improve getCollection method #13

Closed d-callan closed 8 months ago

d-callan commented 8 months ago

This will let getCollection return phyloseq objects as well, though not by default. It also adds a flag to only return continuous metadata variables, so that passing the resulting AbundanceData object to microbiomeComputations::correlation wont fail.