microbiomeDB / microbiomeData

An R package containing all of the curated datasets from MicrobiomeDB.org
https://microbiomedb.github.io/microbiomeData/
Apache License 2.0
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The great refactor #19

Closed d-callan closed 8 months ago

d-callan commented 8 months ago

Summary:

  1. Moved AbundanceData, AbsoluteAbundanceData and SampleMetadata from computes to here
  2. removed dependency on computes package
  3. updated roxygen documentation to pass r cmd check
  4. stopped lazy-loading data, now studies are avilable on request
  5. updated saved studies so they load properly in the new env (without computes package dep)
  6. moved all test data files to a dedicated location under testthat