search

microbiomedata / issues

public repo for issues related to NMDC work
2 stars 1 forks source link

NMDC Submission: c51acea6-88ba-4fd3-b369-5253fdc84904 #574

Closed mslarae13 closed 2 months ago

mslarae13 commented 8 months ago

Submitter: Kristen Peach Submission ID: c51acea6-88ba-4fd3-b369-5253fdc84904 Have data already been generated for your study? : Yes PI: Shengwei Hou Status: Submitted Pending Review NCBI BioProject: PRJNA641116 Alternative Names / IDs: SRP268310 Data Types

Sample type: built environment Number of samples: 3 Note: submitting public data on behalf of PI as a test case for data integration with NASA's Open Science Data Repository

mslarae13 commented 6 months ago

This one looks almost complete.

I will reach out to the submitter

mslarae13 commented 2 months ago

This study appears to be metaGs from isolates from diverse environments, including in association with plant roots, with algae, as part of a lignocellulose degrading community, from a hospital environment, as a human opportunistic pathogen, or as reported in this study, from a surface within the International Space Station. Important environments, but not a full microbiome study. Sequencing of cultured isolate, not a metaG, NMDC supports multi-omics from microbial communities, not isolated microbes. https://github.com/microbiomedata/issues/issues/759