Closed aclum closed 5 months ago
We are expecting an updated container from Neha that has the eukcc component shortly so we may want to combine these updates.
Appears to be active. Will move to next sprint for completion. FYI @chienchi @aclum
This is the container we should use library.jgi.doe.gov:5050/metagenome-science-program/mbin-docker:v1.0
Neha is making her dockerhub private shortly so we shouldn't use containers from dockerhub's njvarghese namespace.
We do not have permission to distribute these files, they were added with commit id 14ec4dafe468223854332a8664364f88d852cdcb in June 2023. I have removed them in the master branch. We either need to update the mbin_nmdc task in the wdl such that it only requires Neha's container, njvarghese/mbin:v0.4, or we need to work with Neha to include mbin_stats.py, which I believe is NMDC code, in a new version of the container.