Closed aclum closed 2 months ago
The merge of wdl 1.0 duplicated some output values in crt.wdl of the run task.
see minwdl linting miniwdl check ./annotation_full.wdl (./annotation_full.wdl Ln 3 Col 1) Failed to import ./structural-annotation.wdl (./structural-annotation.wdl Ln 5 Col 1) Failed to import crt.wdl (crt.wdl Ln 48 Col 5) Multiple declarations of crisprs File crisprs = "~{prefix}_crt.crisprs" ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ (crt.wdl Ln 49 Col 5) Multiple declarations of gff File gff = "~{prefix}_crt.gff" ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ (crt.wdl Ln 50 Col 5) Multiple declarations of crt_out File crt_out = "~{prefix}_crt.out" ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
The merge of wdl 1.0 duplicated some output values in crt.wdl of the run task.
see minwdl linting miniwdl check ./annotation_full.wdl (./annotation_full.wdl Ln 3 Col 1) Failed to import ./structural-annotation.wdl (./structural-annotation.wdl Ln 5 Col 1) Failed to import crt.wdl (crt.wdl Ln 48 Col 5) Multiple declarations of crisprs File crisprs = "~{prefix}_crt.crisprs" ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ (crt.wdl Ln 49 Col 5) Multiple declarations of gff File gff = "~{prefix}_crt.gff" ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ (crt.wdl Ln 50 Col 5) Multiple declarations of crt_out File crt_out = "~{prefix}_crt.out" ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^