microbiomedata / nmdc-aggregator

Scripts that periodically aggregate data related to KEGG search
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Update generate_metap_agg.py script to source ids from new slot #13

Closed kheal closed 1 day ago

kheal commented 2 months ago

This will depend on the completion of https://github.com/microbiomedata/nmdc-schema/issues/2157 and https://github.com/microbiomedata/nmdc-schema/issues/1253 and https://github.com/microbiomedata/issues/issues/897.

We will need to heavily edit the generate_metap_agg.py script to source data from the newly refactored records to comply with the newly refactored FunctionalAnnotationAggMember class.

Once this is working and the data portal is updated to source only the functional_annotation_agg records, we can purge the original metap functional annotation records.

kheal commented 1 day ago

Going a different route, See #26