generate aggregation results for COG and Pfam. Add tests

microbiomedata / nmdc-aggregator

Scripts that periodically aggregate data related to KEGG search

0 stars 0 forks source link

Closed chienchi closed 2 months ago

chienchi commented 2 months ago

generate aggregation results for COG and Pfam by parsing corresponding line in the gff file.
rename get_kegg_counts to get_functional_annotation_counts
add pytest on AnnotationLine Class and get_functional_annotation_counts in MetaGenomeFuncAgg Class