microbiomedata / nmdc-edge

Web-based interface to the NMDC EDGE platform
https://nmdc-edge.org
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metaT failing at rfam #208

Closed mflynn-lanl closed 1 week ago

mflynn-lanl commented 3 months ago

Workflow Name metaT

Project URL https://nmdc-edge.org/admin/project?code=dekwfq0w9LzKA52O

Additional Info metaT fails for smaller samples while running rfam, including /expanse/projects/nmdc/edge_app/nmdc-edge/data/test_data/Metatranscriptomics/test_small_interleave.fastq.gz I've tried running using the metaT repository but it fails in the same place. The stderr file is empty and there doesn't seem to be anything helpful in the stdout file or in the Cromwell metadata

kaijli commented 2 months ago

https://github.com/microbiomedata/metaT/issues/35