Because it uses nmdc-schemav10.5.4, it requires pymongo==^4.7.2. However, its requirements.txt file currently indicates that it requires pymongo==4.5.0 (source).
The reason the notebook's requirements.txt file is not coherent with the notebook is that I forgot to git add the local changes I made to the requirements.txt file when I introduced the notebook into this repository.
Task
[x] Update the requirements.txt file so that it says pymongo==4.7.2.
Background
In
nmdc-schemaversion v10.3.0, thepymongorequirement waspymongo = "^4.3.3".In
nmdc-schemaversion v10.5.4, thepymongorequirement ispymongo = "^4.7.2".Problem
A migration notebook was recently introduced into this repository via PR https://github.com/microbiomedata/nmdc-runtime/pull/558.
Because it uses
nmdc-schemav10.5.4, it requirespymongo==^4.7.2. However, itsrequirements.txtfile currently indicates that it requirespymongo==4.5.0(source).The reason the notebook's
requirements.txtfile is not coherent with the notebook is that I forgot togit addthe local changes I made to therequirements.txtfile when I introduced the notebook into this repository.Task
requirements.txtfile so that it sayspymongo==4.7.2.