Describe the bug
I tried using dagit-dev to run the GOLD translator code and am getting errors. @sujaypatil96 confirmed that his attempts produce the same error.
Screenshots
If applicable, add screenshots to help explain your problem.
Acceptance Criteria
Successful run in dagit dev or dagit prod for gold_study_to_database for GOLD study ID Gs0126301
Additional context
`KeyError: None
File "/usr/local/lib/python3.10/site-packages/dagster/_core/execution/plan/utils.py", line 54, in op_execution_error_boundary
yield
File "/usr/local/lib/python3.10/site-packages/dagster/_utils/init.py", line 482, in iterate_with_context
next_output = next(iterator)
File "/usr/local/lib/python3.10/site-packages/dagster/_core/execution/plan/compute_generator.py", line 140, in _coerce_op_compute_fn_to_iterator
result = invoke_compute_fn(
File "/usr/local/lib/python3.10/site-packages/dagster/_core/execution/plan/compute_generator.py", line 128, in invoke_compute_fn
return fn(context, args_to_pass) if context_arg_provided else fn(args_to_pass)
File "/opt/dagster/lib/nmdc_runtime/site/ops.py", line 661, in nmdc_schema_database_from_gold_study
database = translator.get_database()
File "/opt/dagster/lib/nmdc_runtime/site/translation/gold_translator.py", line 666, in get_database
database.data_generation_set = [
File "/opt/dagster/lib/nmdc_runtime/site/translation/gold_translator.py", line 672, in
nmdc_biosample_id=gold_to_nmdc_biosample_ids[
Describe the bug I tried using dagit-dev to run the GOLD translator code and am getting errors. @sujaypatil96 confirmed that his attempts produce the same error.
To Reproduce Steps to reproduce the behavior:
Screenshots If applicable, add screenshots to help explain your problem.
Acceptance Criteria
Additional context `KeyError: None File "/usr/local/lib/python3.10/site-packages/dagster/_core/execution/plan/utils.py", line 54, in op_execution_error_boundary yield File "/usr/local/lib/python3.10/site-packages/dagster/_utils/init.py", line 482, in iterate_with_context next_output = next(iterator) File "/usr/local/lib/python3.10/site-packages/dagster/_core/execution/plan/compute_generator.py", line 140, in _coerce_op_compute_fn_to_iterator result = invoke_compute_fn( File "/usr/local/lib/python3.10/site-packages/dagster/_core/execution/plan/compute_generator.py", line 128, in invoke_compute_fn return fn(context, args_to_pass) if context_arg_provided else fn(args_to_pass) File "/opt/dagster/lib/nmdc_runtime/site/ops.py", line 661, in nmdc_schema_database_from_gold_study database = translator.get_database() File "/opt/dagster/lib/nmdc_runtime/site/translation/gold_translator.py", line 666, in get_database database.data_generation_set = [ File "/opt/dagster/lib/nmdc_runtime/site/translation/gold_translator.py", line 672, in
nmdc_biosample_id=gold_to_nmdc_biosample_ids[