Closed mbthornton-lbl closed 3 months ago
@picowatt this is a proteomics data object. can you make sure all the proteomics data objects are deleted?
@picowatt Is there any other data apart from the emsl:output_
ID pattern that I need to know about when I go deleting?
Re-extracted the Stegen study and re-ran validtion:
% linkml-validate -s ../../local/nmdc-schema-v10.1.1.yaml ../../local/nmdc:sty-11-aygzgv51.yaml
INFO:root:Using SchemaView with im=None
[ERROR] [../../local/nmdc:sty-11-aygzgv51.yaml/0] Additional properties are not allowed ('award_dois', 'publication_dois' were unexpected) in /study_set/0
[ERROR] [../../local/nmdc:sty-11-aygzgv51.yaml/0] 'study_category' is a required property in /study_set/0
study_category
, award_dois
, and publication_dois
errors are expected here, and will be addressed by the v10 data migration process
@aclum @picowatt Based on the results of linkml-validate
above, this ticket can be closed. There were not code changes so noPR