microbiomedata / nmdc-schema

National Microbiome Data Collaborative (NMDC) unified data model
https://microbiomedata.github.io/nmdc-schema/
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use linter to standardize element names #456

Closed turbomam closed 1 year ago

turbomam commented 1 year ago
linkml-lint --format tsv --output assets/name_linting.tsv  --config assets/linter_config_default.yaml src/schema
turbomam commented 1 year ago

For example

no_empty_title:
  level: disabled
permissible_values_format:
  level: disabled
  format: uppersnake
tree_root_class:
  level: disabled
  root_class_name: Container
  validate_existing_class_name: false
recommended:
  level: disabled
  include: [ ]
  exclude: [ ]
no_xsd_int_type:
  level: disabled
no_invalid_slot_usage:
  level: disabled
standard_naming:
  level: warning
  permissible_values_upper_case: false
canonical_prefixes:
  level: warning
  prefixmaps_contexts:
    - merged