Open turbomam opened 1 year ago
@turbomam my contribution to enabling a csv export of biosamples for annotation would be this nmdc-runtime code that demos flattening JSON hierarchy and folding in other pertinent info to a biosample row if desired. In this case, it was including all omics types associated with omics_processing_set
documents that has_input
that biosample.
@turbomam We have #467 and there's a merged PR for this issue. Can we close this one if favor of the new issue?
@emileyfadrosh has requested tags that would make it easier to find biosamples with shared methods, funding, etc. in the Data Portal. Other NMDC team members have been supportive.
I will implement this as a new slot on the Biosmaple class, whose range will be an enumeration
@emileyfadrosh and others will be responsible for
Proposed permissible values:
cc @sujaypatil96 @cmungall