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microbiomedata / nmdc-schema

National Microbiome Data Collaborative (NMDC) unified data model
https://microbiomedata.github.io/nmdc-schema/
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sheets_and_friends doesn't currently have a method for modifying annotations #748

Closed turbomam closed 1 year ago

turbomam commented 1 year ago

@mslarae13, I will be removing the Biosample slot_usages on MIxS terms. Everything besides the annotations will be implemented in sheets_and_friends

See https://docs.google.com/spreadsheets/d/1_TSuvEUX68g_o3r1d9wvOYMMbZ3vO4eluvAd2wNJoSU/edit#gid=826074070

class slot action target path LinkML implementation notes value
bioscales|soil extreme_event   annotations:expected_value     date, string
bioscales|soil fire   annotations:expected_value     date string
bioscales|soil flooding   annotations:expected_value     date string
biofilm|bioscales|sediment|soil water_content   annotations:expected_value     string
biofilm|bioscales|sediment|soil water_content   annotations:preferred_unit     gram per gram or cubic centimeter per cubic centimeter
turbomam commented 1 year ago

actually, there is a replace_annotation action