Closed kaijli closed 2 months ago
https://github.com/microbiomedata/nmdc_automation/blob/adbf0ef9abb8c7b70916ff96b6ca13730964252c/configs/workflows.yaml#L298-L317
Need to update MAGs inputs from annotation outputs and updated MAGs workflow. Make sure all changes from MAGs repo WDL are incorporated. Run sample test after changes.
https://github.com/microbiomedata/metaMAGs/blob/f4ed697d1b5cf2a5c169c93c6f8746a0c83b5738/mbin_nmdc.wdl#L3-L28
https://github.com/microbiomedata/mg_annotation/blob/6346f27d5055aed9a240b0ab2ac2cf5bf7a3451e/annotation_full.wdl#L183-L214
https://github.com/microbiomedata/nmdc_automation/blob/adbf0ef9abb8c7b70916ff96b6ca13730964252c/configs/workflows.yaml#L298-L317
Need to update MAGs inputs from annotation outputs and updated MAGs workflow. Make sure all changes from MAGs repo WDL are incorporated. Run sample test after changes.
https://github.com/microbiomedata/metaMAGs/blob/f4ed697d1b5cf2a5c169c93c6f8746a0c83b5738/mbin_nmdc.wdl#L3-L28
https://github.com/microbiomedata/mg_annotation/blob/6346f27d5055aed9a240b0ab2ac2cf5bf7a3451e/annotation_full.wdl#L183-L214