Currently, the taxonomy and NOM R notebooks define functions for interacting with the NMDC API. The functions are essentially the same. (e.g. cell 2 here)
Rather than copy pasting the same code into every new notebook, it would be better to pull those functions out into an R package accessible by all notebooks in this repo.
Completion criteria:
[ ] An R package exists in this repo containing the API interaction functions we've written so far
[ ] The existing notebooks use functions from the package and no longer define them internally
[ ] It plays nicely with our renv .lock file (someone newly cloning the repo can run the notebooks after using renv::restore() )
Currently, the taxonomy and NOM R notebooks define functions for interacting with the NMDC API. The functions are essentially the same. (e.g. cell 2 here)
Rather than copy pasting the same code into every new notebook, it would be better to pull those functions out into an R package accessible by all notebooks in this repo.
Completion criteria:
renv::restore())