illustrate how NCBI Biosamples could be instantiated from either efetch or LBL's Biosample SQL database

microbiomedata / submission-schema

MIT License

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Open turbomam opened 1 year ago

turbomam commented 1 year ago

Requires a NERSC account. Preferaably run ssh-proxy first to avoid entering the password+MFA over and over again.

ssh -L 15432:biosample-postgres-loadbalancer.mam.production.svc.spin.nersc.org:5432 <NERSC_USER_NAME>@dtn01.nersc.gov

host: localhost
port: 15432
user: biosample_guest
database: ncbi_biosamples

Contact @eecavanna or me for the password