Add JGI metagenomics long read class to submission schema

microbiomedata / submission-schema

https://microbiomedata.github.io/submission-schema/

MIT License

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Add JGI metagenomics long read class to submission schema #185

Closed pkalita-lbl closed 4 months ago

pkalita-lbl commented 4 months ago

Summary

Add new JgiMgLrInterface class. It is largely similar to the existing JgiMgInterface class, but it represents metadata for samples to go for long-read sequencing. A few slots have different required/recommended values in JgiMgLrInterface as compared to JgiMgInterface.
The definition of AnalysisTypeEnum is removed. It's not needed here since it is imported from nmdc-schema.
The nmdc-schema dependency is bumped up to v10.1.0.

pkalita-lbl commented 4 months ago

I don't think anything downstream relies on any particular description format, so yeah they should be more descriptive. See also: #186. I'll add something better for the classes added here.

pkalita-lbl commented 4 months ago

@turbomam Descriptions updated. Any other feedback?