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microsoft / CyberBattleSim

An experimentation and research platform to investigate the interaction of automated agents in an abstract simulated network environments.
MIT License
1.65k stars 257 forks source link

init.sh doesn't work #97

Closed ZihaoXie closed 1 year ago

ZihaoXie commented 1 year ago

(CBS) xzh@xzh-virtual-machine:~/Desktop/CyberBattleSim$ ./init.sh ++ dirname ./init.sh

Installing the NodeSource Node.js 16.x repo...

Populating apt-get cache...

Confirming "focal" is supported...

Adding the NodeSource signing key to your keyring...

Creating apt sources list file for the NodeSource Node.js 16.x repo...

Running apt-get update for you...

Run sudo apt-get install -y nodejs to install Node.js 16.x and npm

You may also need development tools to build native addons:

 sudo apt-get install gcc g++ make

To install the Yarn package manager, run:

 curl -sL https://dl.yarnpkg.com/debian/pubkey.gpg | gpg --dearmor | sudo tee /usr/share/keyrings/yarnkey.gpg >/dev/null
 echo "deb [signed-by=/usr/share/keyrings/yarnkey.gpg] https://dl.yarnpkg.com/debian stable main" | sudo tee /etc/apt/sources.list.d/yarn.list
 sudo apt-get update && sudo apt-get install yarn

removed 14 packages, changed 75 packages, and audited 232 packages in 6s

14 packages are looking for funding run npm fund for details

found 0 vulnerabilities

Alternative: /usr/bin/python3.9 Priority: 2

added 1 package in 6s done. pyright 1.1.271

The following packages have unmet dependencies: npm : Depends: nodejs (>= 6.11~) Depends: node-abbrev (>= 1.1.1~) but it is not going to be installed Depends: node-ajv but it is not going to be installed Depends: node-ansi but it is not going to be installed Depends: node-ansi-regex (>= 3.0~) but it is not going to be installed Depends: node-ansi-styles but it is not going to be installed Depends: node-ansistyles but it is not going to be installed Depends: node-aproba but it is not going to be installed Depends: node-archy (>= 1.0~) but it is not going to be installed Depends: node-are-we-there-yet but it is not going to be installed Depends: node-asap but it is not going to be installed Depends: node-asn1 but it is not going to be installed Depends: node-assert-plus but it is not going to be installed Depends: node-asynckit but it is not going to be installed Depends: node-aws4 but it is not going to be installed Depends: node-aws-sign2 but it is not going to be installed Depends: node-balanced-match but it is not going to be installed Depends: node-bcrypt-pbkdf but it is not going to be installed Depends: node-bl but it is not going to be installed Depends: node-bluebird but it is not going to be installed Depends: node-boxen but it is not going to be installed Depends: node-brace-expansion but it is not going to be installed Depends: node-builtin-modules but it is not going to be installed Depends: node-builtins but it is not going to be installed Depends: node-cacache but it is not going to be installed Depends: node-call-limit but it is not going to be installed Depends: node-camelcase but it is not going to be installed Depends: node-caseless but it is not going to be installed Depends: node-chalk but it is not going to be installed Depends: node-chownr but it is not going to be installed Depends: node-ci-info but it is not going to be installed Depends: node-cli-boxes but it is not going to be installed Depends: node-cliui but it is not going to be 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it is not going to be installed Depends: node-fs-write-stream-atomic but it is not going to be installed Depends: node-function-bind but it is not going to be installed Depends: node-gauge but it is not going to be installed Depends: node-genfun but it is not going to be installed Depends: node-get-caller-file but it is not going to be installed Depends: node-getpass but it is not going to be installed Depends: node-glob (>= 7.1.2~) but it is not going to be installed Depends: node-got but it is not going to be installed Depends: node-graceful-fs (>= 4.1.11~) but it is not going to be installed Depends: node-gyp (>= 3.6.2~) but it is not going to be installed Depends: node-har-schema but it is not going to be installed Depends: node-har-validator but it is not going to be installed Depends: node-has-flag but it is not going to be installed Depends: node-has-unicode but it is not going to be installed Depends: node-hosted-git-info (>= 2.6~) but it is not going to be installed Depends: node-http-signature but it is not going to be installed Depends: node-iconv-lite but it is not going to be installed Depends: node-iferr but it is not going to be installed Depends: node-import-lazy but it is not going to be installed Depends: node-imurmurhash but it is not going to be installed Depends: node-inflight but it is not going to be installed Depends: node-inherits (>= 2.0.3~) but it is not going to be installed Depends: node-ini (>= 1.3.5~) but it is not going to be installed Depends: node-invert-kv but it is not going to be installed Depends: node-ip but it is not going to be installed Depends: node-ip-regex but it is not going to be installed Depends: node-isarray but it is not going to be installed Depends: node-isexe but it is not going to be installed Depends: node-is-npm but it is not going to be installed Depends: node-is-obj but it is not going to be installed Depends: node-is-path-inside but it is not going to be installed Depends: node-is-retry-allowed but it is 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but it is not going to be installed Depends: node-lodash but it is not going to be installed Depends: node-lockfile (>= 1.0.3~) but it is not going to be installed Depends: node-lowercase-keys but it is not going to be installed Depends: node-lru-cache (>= 4.1.1~) but it is not going to be installed Depends: node-make-dir but it is not going to be installed Depends: node-mem but it is not going to be installed Depends: node-mime but it is not going to be installed Depends: node-mime-types but it is not going to be installed Depends: node-mimic-fn but it is not going to be installed Depends: node-minimatch but it is not going to be installed Depends: node-minimist but it is not going to be installed Depends: node-mississippi but it is not going to be installed Depends: node-mkdirp (>= 0.5.1~) but it is not going to be installed Depends: node-move-concurrently but it is not going to be installed Depends: node-ms but it is not going to be installed Depends: node-mute-stream but it is not 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Depends: node-path-exists but it is not going to be installed Depends: node-path-is-absolute but it is not going to be installed Depends: node-path-is-inside but it is not going to be installed Depends: node-promise-inflight but it is not going to be installed Depends: node-promise-retry but it is not going to be installed Depends: node-promzard but it is not going to be installed Depends: node-performance-now but it is not going to be installed Depends: node-p-finally but it is not going to be installed Depends: node-p-is-promise but it is not going to be installed Depends: node-pify but it is not going to be installed Depends: node-p-limit but it is not going to be installed Depends: node-p-locate but it is not going to be installed Depends: node-prepend-http but it is not going to be installed Depends: node-process-nextick-args but it is not going to be installed Depends: node-proto-list but it is not going to be installed Depends: node-prr but it is not going to be installed Depends: node-pseudomap but it is not going to be installed Depends: node-psl but it is not going to be installed Depends: node-pump but it is not going to be installed Depends: node-pumpify but it is not going to be installed Depends: node-punycode but it is not going to be installed Depends: node-qs but it is not going to be installed Depends: node-qw but it is not going to be installed Depends: node-rc but it is not going to be installed Depends: node-read (>= 1.0.7~) but it is not going to be installed Depends: node-readable-stream but it is not going to be installed Depends: node-read-package-json (>= 2.0.13~) but it is not going to be installed Depends: node-registry-auth-token but it is not going to be installed Depends: node-registry-url but it is not going to be installed Depends: node-request (>= 2.83~) but it is not going to be installed Depends: node-require-main-filename but it is not going to be installed Depends: node-require-directory but it is not going to be installed Depends: node-resolve-from (>= 4.0~) but it is not going to be installed Depends: node-retry (>= 0.10.1~) but it is not going to be installed Depends: node-rimraf (>= 2.6.2~) but it is not going to be installed Depends: node-run-queue but it is not going to be installed Depends: node-safe-buffer but it is not going to be installed Depends: node-semver (>= 5.5~) but it is not going to be installed Depends: node-set-blocking but it is not going to be installed Depends: node-sha (>= 2.0.1~) but it is not going to be installed Depends: node-shebang-command but it is not going to be installed Depends: node-shebang-regex but it is not going to be installed Depends: node-signal-exit but it is not going to be installed Depends: node-slide (>= 1.1.6~) but it is not going to be installed Depends: node-sorted-object but it is not going to be installed Depends: node-slash but it is not going to be installed Depends: node-semver-diff but it is not going to be installed Depends: node-spdx-correct but it is not going to be installed Depends: node-spdx-exceptions but it is not going to be installed Depends: node-spdx-expression-parse but it is not going to be installed Depends: node-spdx-license-ids but it is not going to be installed Depends: node-sshpk but it is not going to be installed Depends: node-ssri but it is not going to be installed Depends: node-stream-each but it is not going to be installed Depends: node-stream-iterate but it is not going to be installed Depends: node-stream-shift but it is not going to be installed Depends: node-strict-uri-encode but it is not going to be installed Depends: node-string-decoder but it is not going to be installed Depends: node-string-width but it is not going to be installed Depends: node-strip-ansi (>= 4.0~) but it is not going to be installed Depends: node-strip-json-comments but it is not going to be installed Depends: node-strip-eof but it is not going to be installed Depends: node-supports-color but it is not going to be installed Depends: node-tar (>= 4.4~) but it is not going to be installed Depends: node-term-size but it is not going to be installed Depends: node-text-table but it is not going to be installed Depends: node-through but it is not going to be installed Depends: node-through2 but it is not going to be installed Depends: node-timed-out but it is not going to be installed Depends: node-tough-cookie but it is not going to be installed Depends: node-tunnel-agent but it is not going to be installed Depends: node-tweetnacl but it is not going to be installed Depends: node-typedarray but it is not going to be installed Depends: node-uid-number but it is not going to be installed Depends: node-unique-filename but it is not going to be installed Depends: node-unique-string but it is not going to be installed Depends: node-unpipe but it is not going to be installed Depends: node-url-parse-lax but it is not going to be installed Depends: node-util-deprecate but it is not going to be installed Depends: node-uuid but it is not going to be installed Depends: node-validate-npm-package-name but it is not going to be installed Depends: node-verror but it is not going to be installed Depends: node-which (>= 1.3~) but it is not going to be installed Depends: node-which-module but it is not going to be installed Depends: node-wide-align but it is not going to be installed Depends: node-widest-line but it is not going to be installed Depends: node-wrap-ansi but it is not going to be installed Depends: node-wrappy but it is not going to be installed Depends: node-wcwidth.js but it is not going to be installed Depends: node-write-file-atomic but it is not going to be installed Depends: node-xdg-basedir but it is not going to be installed Depends: node-xtend but it is not going to be installed Depends: node-yargs but it is not going to be installed Depends: node-yargs-parser but it is not going to be installed Depends: node-yallist but it is not going to be installed Depends: node-y18n but it is not going to be installed E: Unable to correct problems, you have held broken packages. npm WARN deprecated har-validator@5.1.5: this library is no longer supported npm WARN deprecated w3c-hr-time@1.0.2: Use your platform's native performance.now() and performance.timeOrigin. npm WARN deprecated request-promise-native@1.0.9: request-promise-native has been deprecated because it extends the now deprecated request package, see https://github.com/request/request/issues/3142 npm WARN deprecated left-pad@1.3.0: use String.prototype.padStart() npm WARN deprecated uuid@3.4.0: Please upgrade to version 7 or higher. Older versions may use Math.random() in certain circumstances, which is known to be problematic. See https://v8.dev/blog/math-random for details. npm WARN deprecated request@2.88.2: request has been deprecated, see https://github.com/request/request/issues/3142 npm WARN deprecated har-validator@5.1.5: this library is no longer supported npm WARN deprecated uuid@3.4.0: Please upgrade to version 7 or higher. Older versions may use Math.random() in certain circumstances, which is known to be problematic. See https://v8.dev/blog/math-random for details. npm WARN deprecated request@2.88.2: request has been deprecated, see https://github.com/request/request/issues/3142 npm WARN deprecated electron-download@4.1.1: Please use @electron/get moving forward. npm ERR! code EEXIST npm ERR! path /usr/bin/orca npm ERR! EEXIST: file already exists npm ERR! File exists: /usr/bin/orca npm ERR! Remove the existing file and try again, or run npm npm ERR! with --force to overwrite files recklessly.

npm ERR! A complete log of this run can be found in: npm ERR! /home/xzh/.npm/_logs/2022-12-21T12_39_06_767Z-debug-0.log (CBS) xzh@xzh-virtual-machine:~/Desktop/CyberBattleSim$ npm audit fix --force npm WARN using --force Recommended protections disabled. npm ERR! code ENOLOCK npm ERR! audit This command requires an existing lockfile. npm ERR! audit Try creating one first with: npm i --package-lock-only npm ERR! audit Original error: loadVirtual requires existing shrinkwrap file

npm ERR! A complete log of this run can be found in: npm ERR! /home/xzh/.npm/_logs/2022-12-21T12_40_17_566Z-debug-0.log

ZihaoXie commented 1 year ago

(CBS) xzh@xzh-virtual-machine:~/Desktop/CyberBattleSim$ ./init.sh ++ dirname ./init.sh

  • pushd . ~/Desktop/CyberBattleSim ~/Desktop/CyberBattleSim ++ lsb_release -rs
  • UBUNTU_VERSION=20.04
  • verlte 20.04 20 ++ echo -e '20.04\n20' ++ head -n1 ++ sort -V
  • '[' 20.04 = 20 ']'
  • OLDER_UBUNTU=0
  • '[' 0 == 1 ']'
  • ADD_PYTHON39_APTREPO=0
  • '[' '' '!=' '' ']'
  • CREATE_VENV=1
  • getopts nr opt
  • SUDO=
  • (( 1000 != 0 ))
  • SUDO='sudo -E'
  • '[' '!' -z '' ']'
  • '[' 0 == 1 ']'
  • sudo -E apt update [sudo] password for xzh: Hit:1 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal InRelease Hit:2 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates InRelease Hit:3 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-backports InRelease Hit:4 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-security InRelease Reading package lists... Done Building dependency tree Reading state information... Done 539 packages can be upgraded. Run 'apt list --upgradable' to see them.
  • sudo -E apt-get install curl -y Reading package lists... Done Building dependency tree Reading state information... Done The following additional packages will be installed: libcurl4 The following NEW packages will be installed: curl libcurl4 0 upgraded, 2 newly installed, 0 to remove and 539 not upgraded. Need to get 396 kB of archives. After this operation, 1,123 kB of additional disk space will be used. Get:1 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libcurl4 amd64 7.68.0-1ubuntu2.14 [235 kB] Get:2 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 curl amd64 7.68.0-1ubuntu2.14 [161 kB] Fetched 396 kB in 1s (559 kB/s) Selecting previously unselected package libcurl4:amd64. (Reading database ... 157868 files and directories currently installed.) Preparing to unpack .../libcurl4_7.68.0-1ubuntu2.14_amd64.deb ... Unpacking libcurl4:amd64 (7.68.0-1ubuntu2.14) ... Selecting previously unselected package curl. Preparing to unpack .../curl_7.68.0-1ubuntu2.14_amd64.deb ... Unpacking curl (7.68.0-1ubuntu2.14) ... Setting up libcurl4:amd64 (7.68.0-1ubuntu2.14) ... Setting up curl (7.68.0-1ubuntu2.14) ... Processing triggers for man-db (2.9.1-1) ... Processing triggers for libc-bin (2.31-0ubuntu9) ...
  • curl -sL https://deb.nodesource.com/setup_16.x
  • sudo -E bash -

Installing the NodeSource Node.js 16.x repo...

Populating apt-get cache...

Confirming "focal" is supported...

Adding the NodeSource signing key to your keyring...

Creating apt sources list file for the NodeSource Node.js 16.x repo...

Running apt-get update for you...

Run sudo apt-get install -y nodejs to install Node.js 16.x and npm

You may also need development tools to build native addons:

 sudo apt-get install gcc g++ make

To install the Yarn package manager, run:

 curl -sL https://dl.yarnpkg.com/debian/pubkey.gpg | gpg --dearmor | sudo tee /usr/share/keyrings/yarnkey.gpg >/dev/null
 echo "deb [signed-by=/usr/share/keyrings/yarnkey.gpg] https://dl.yarnpkg.com/debian stable main" | sudo tee /etc/apt/sources.list.d/yarn.list
 sudo apt-get update && sudo apt-get install yarn
  • '[' 0 == 1 ']'
  • cat apt-requirements.txt
  • sudo -E xargs apt-get install -y Reading package lists... Done Building dependency tree Reading state information... Done lsb-release is already the newest version (11.1.0ubuntu2). lsb-release set to manually installed. git is already the newest version (1:2.25.1-1ubuntu3.6). The following additional packages will be installed: autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu cpp-9 dpkg-dev fakeroot freeglut3 g++ g++-9 gcc gcc-10-base gcc-9 gcc-9-base gettext gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpg-wks-server gpgconf gpgsm gpgv intltool libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libasan5 libatomic1 libbinutils libc-dev-bin libc6 libc6-dbg libc6-dev libcc1-0 libcroco3 libcrypt-dev libctf-nobfd0 libctf0 libdpkg-perl libexpat1 libexpat1-dev libfakeroot libgcc-9-dev libgcc-s1 libgomp1 libitm1 liblsan0 libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3.8 libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libquadmath0 libsigsegv2 libstdc++-9-dev libstdc++6 libtsan0 libubsan1 linux-libc-dev m4 make manpages-dev python-pip-whl python-pkg-resources python2 python2-minimal python2.7 python2.7-minimal python3-atomicwrites python3-attr python3-importlib-metadata python3-lib2to3 python3-more-itertools python3-packaging python3-pluggy python3-py python3-pyparsing python3-software-properties python3-wcwidth python3-zipp python3.8 python3.8-dev python3.8-minimal python3.9-minimal software-properties-gtk zlib1g zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc libtool binutils-doc gcc-9-locales tor debian-keyring g++-multilib g++-9-multilib gcc-9-doc gcc-multilib flex bison gcc-doc gcc-9-multilib gettext-doc autopoint libasprintf-dev libgettextpo-dev parcimonie xloadimage scdaemon glibc-doc bzr libstdc++-9-doc m4-doc make-doc devscripts python-setuptools python2-doc python-tk python2.7-doc binfmt-support python-attr-doc python3-tk python3-numpy libgle3 subversion python-pyparsing-doc python-setuptools-doc python3.8-venv python3.8-doc python3.9-doc The following NEW packages will be installed: apt-transport-https autoconf automake autotools-dev binutils binutils-common binutils-x86-64-linux-gnu build-essential dpkg-dev fakeroot freeglut3 g++ g++-9 gcc gcc-9 gettext intltool libalgorithm-diff-perl libalgorithm-diff-xs-perl libalgorithm-merge-perl libasan5 libatomic1 libbinutils libc-dev-bin libc6-dev libcroco3 libcrypt-dev libctf-nobfd0 libctf0 libexpat1-dev libfakeroot libgcc-9-dev libitm1 liblsan0 libpython2-stdlib libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3.8-dev libpython3.9 libpython3.9-dev libpython3.9-minimal libpython3.9-stdlib libquadmath0 libsigsegv2 libstdc++-9-dev libtsan0 libubsan1 linux-libc-dev m4 make manpages-dev nodejs python-distutils-extra python-pip-whl python-pkg-resources python2 python2-minimal python2.7 python2.7-minimal python3-atomicwrites python3-attr python3-dev python3-distutils python3-importlib-metadata python3-lib2to3 python3-more-itertools python3-opengl python3-packaging python3-pluggy python3-py python3-pyparsing python3-pytest python3-setuptools python3-wcwidth python3-zipp python3.8-dev python3.9 python3.9-dev python3.9-minimal python3.9-venv zlib1g-dev The following packages will be upgraded: ca-certificates cpp-9 dirmngr gcc-10-base gcc-9-base gnupg gnupg-l10n gnupg-utils gpg gpg-agent gpg-wks-client gpg-wks-server gpgconf gpgsm gpgv libc6 libc6-dbg libcc1-0 libdpkg-perl libexpat1 libgcc-s1 libgomp1 libpython3.8 libpython3.8-minimal libpython3.8-stdlib libstdc++6 python3-software-properties python3.8 python3.8-minimal software-properties-common software-properties-gtk zlib1g 32 upgraded, 82 newly installed, 0 to remove and 507 not upgraded. Need to get 112 MB/130 MB of archives. After this operation, 393 MB of additional disk space will be used. Get:1 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libc6-dbg amd64 2.31-0ubuntu9.9 [20.0 MB] Get:2 https://deb.nodesource.com/node_16.x focal/main amd64 nodejs amd64 16.19.0-deb-1nodesource1 [27.2 MB] Get:3 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libc6 amd64 2.31-0ubuntu9.9 [2,722 kB] Get:4 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 libpython2.7-minimal amd64 2.7.18-1~20.04.3 [336 kB] Get:5 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python2.7-minimal amd64 2.7.18-1~20.04.3 [1,280 kB] Get:6 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 python2-minimal amd64 2.7.17-2ubuntu4 [27.5 kB] Get:7 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 libpython2.7-stdlib amd64 2.7.18-1~20.04.3 [1,888 kB] Get:8 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python2.7 amd64 2.7.18-1~20.04.3 [248 kB] Get:9 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 libpython2-stdlib amd64 2.7.17-2ubuntu4 [7,072 B] Get:10 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 python2 amd64 2.7.17-2ubuntu4 [26.5 kB] Get:11 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 libpython3.9-minimal amd64 3.9.5-3ubuntu0~20.04.1 [756 kB] Get:12 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python3.9-minimal amd64 3.9.5-3ubuntu0~20.04.1 [2,022 kB] Get:13 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 apt-transport-https all 2.0.9 [1,704 B] Get:14 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:15 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 m4 amd64 1.4.18-4 [199 kB] Get:16 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 autoconf all 2.69-11.1 [321 kB] Get:17 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:18 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu6 [522 kB] Get:19 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 binutils-common amd64 2.34-6ubuntu1.4 [207 kB] Get:20 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libbinutils amd64 2.34-6ubuntu1.4 [474 kB] Get:21 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libctf-nobfd0 amd64 2.34-6ubuntu1.4 [47.2 kB] Get:22 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libctf0 amd64 2.34-6ubuntu1.4 [46.6 kB] Get:23 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 binutils-x86-64-linux-gnu amd64 2.34-6ubuntu1.4 [1,613 kB] Get:24 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 binutils amd64 2.34-6ubuntu1.4 [3,380 B] Get:25 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libc-dev-bin amd64 2.31-0ubuntu9.9 [71.8 kB] Get:26 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 linux-libc-dev amd64 5.4.0-135.152 [1,121 kB] Get:27 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libcrypt-dev amd64 1:4.4.10-10ubuntu4 [104 kB] Get:28 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libc6-dev amd64 2.31-0ubuntu9.9 [2,519 kB] Get:29 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libitm1 amd64 10.3.0-1ubuntu1~20.04 [26.2 kB] Get:30 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libasan5 amd64 9.4.0-1ubuntu1~20.04.1 [2,751 kB] Get:31 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 liblsan0 amd64 10.3.0-1ubuntu1~20.04 [835 kB] Get:32 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libtsan0 amd64 10.3.0-1ubuntu1~20.04 [2,009 kB] Get:33 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libubsan1 amd64 10.3.0-1ubuntu1~20.04 [784 kB] Get:34 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libquadmath0 amd64 10.3.0-1ubuntu1~20.04 [146 kB] Get:35 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libgcc-9-dev amd64 9.4.0-1ubuntu1~20.04.1 [2,359 kB] Get:36 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 gcc-9 amd64 9.4.0-1ubuntu1~20.04.1 [8,274 kB] Get:37 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 gcc amd64 4:9.3.0-1ubuntu2 [5,208 B] Get:38 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libstdc++-9-dev amd64 9.4.0-1ubuntu1~20.04.1 [1,722 kB] Get:39 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 g++-9 amd64 9.4.0-1ubuntu1~20.04.1 [8,420 kB] Get:40 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 g++ amd64 4:9.3.0-1ubuntu2 [1,604 B] Get:41 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 make amd64 4.2.1-1.2 [162 kB] Get:42 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 dpkg-dev all 1.19.7ubuntu3.2 [679 kB] Get:43 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 build-essential amd64 12.8ubuntu1.1 [4,664 B] Get:44 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libfakeroot amd64 1.24-1 [25.7 kB] Get:45 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 fakeroot amd64 1.24-1 [62.6 kB] Get:46 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 freeglut3 amd64 2.8.1-3 [73.6 kB] Get:47 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] Get:48 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] Get:49 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 intltool all 0.51.0-5ubuntu1 [44.6 kB] Get:50 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libalgorithm-diff-perl all 1.19.03-2 [46.6 kB] Get:51 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libalgorithm-diff-xs-perl amd64 0.04-6 [11.3 kB] Get:52 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libalgorithm-merge-perl all 0.08-3 [12.0 kB] Get:53 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libexpat1-dev amd64 2.2.9-1ubuntu0.6 [116 kB] Get:54 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 libpython3.8-dev amd64 3.8.10-0ubuntu1~20.04.6 [3,949 kB] Get:55 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 libpython3-dev amd64 3.8.2-0ubuntu2 [7,236 B] Get:56 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 libpython3.9-stdlib amd64 3.9.5-3ubuntu0~20.04.1 [1,778 kB] Get:57 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 libpython3.9 amd64 3.9.5-3ubuntu0~20.04.1 [1,714 kB] Get:58 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu1.5 [155 kB] Get:59 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 libpython3.9-dev amd64 3.9.5-3ubuntu0~20.04.1 [4,126 kB] Get:60 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 manpages-dev all 5.05-1 [2,266 kB] Get:61 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 python-pkg-resources all 44.0.0-2 [129 kB] Get:62 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 python-distutils-extra all 2.43 [21.3 kB] Get:63 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python-pip-whl all 20.0.2-5ubuntu1.6 [1,805 kB] Get:64 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 python3-atomicwrites all 1.1.5-2build1 [7,016 B] Get:65 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 python3-attr all 19.3.0-2 [33.9 kB] Get:66 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 python3.8-dev amd64 3.8.10-0ubuntu1~20.04.6 [514 kB] Get:67 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 python3-lib2to3 all 3.8.10-0ubuntu1~20.04 [76.3 kB] Get:68 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[18.4 kB] Get:77 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python3-py all 1.8.1-1ubuntu0.1 [65.6 kB] Get:78 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 python3-wcwidth all 0.1.8+dfsg1-3 [17.4 kB] Get:79 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/universe amd64 python3-pytest all 4.6.9-1 [178 kB] Get:80 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal/main amd64 python3-setuptools all 45.2.0-1 [330 kB] Get:81 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 software-properties-common all 0.99.9.8 [10.6 kB] Get:82 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 software-properties-gtk all 0.99.9.8 [66.0 kB] Get:83 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/main amd64 python3-software-properties all 0.99.9.8 [24.9 kB] Get:84 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python3.9 amd64 3.9.5-3ubuntu0~20.04.1 [423 kB] Get:85 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python3.9-dev amd64 3.9.5-3ubuntu0~20.04.1 [510 kB] Get:86 http://mirrors.tuna.tsinghua.edu.cn/ubuntu focal-updates/universe amd64 python3.9-venv amd64 3.9.5-3ubuntu0~20.04.1 [5,452 B] Fetched 105 MB in 22s (4,781 kB/s) Extracting templates from packages: 100% Preconfiguring packages ... 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Setting up gpgconf (2.2.19-3ubuntu2.2) ... Setting up python-pip-whl (20.0.2-5ubuntu1.6) ... Setting up python3.9-minimal (3.9.5-3ubuntu0~20.04.1) ... Setting up libbinutils:amd64 (2.34-6ubuntu1.4) ... Setting up libpython3.8-stdlib:amd64 (3.8.10-0ubuntu1~20.04.6) ... Setting up libc-dev-bin (2.31-0ubuntu9.9) ... Setting up python3.8 (3.8.10-0ubuntu1~20.04.6) ... Setting up python3-lib2to3 (3.8.10-0ubuntu1~20.04) ... Setting up libalgorithm-diff-xs-perl (0.04-6) ... Setting up libcc1-0:amd64 (10.3.0-1ubuntu1~20.04) ... Setting up gpg (2.2.19-3ubuntu2.2) ... Setting up liblsan0:amd64 (10.3.0-1ubuntu1~20.04) ... Setting up libitm1:amd64 (10.3.0-1ubuntu1~20.04) ... Setting up libpython3.9-stdlib:amd64 (3.9.5-3ubuntu0~20.04.1) ... Setting up gcc-9-base:amd64 (9.4.0-1ubuntu1~20.04.1) ... Setting up libalgorithm-merge-perl (0.08-3) ... Setting up gnupg-utils (2.2.19-3ubuntu2.2) ... Setting up libtsan0:amd64 (10.3.0-1ubuntu1~20.04) ... Setting up libctf0:amd64 (2.34-6ubuntu1.4) ... Setting up python3-distutils (3.8.10-0ubuntu1~20.04) ... Setting up gettext (0.19.8.1-10build1) ... Setting up gpg-agent (2.2.19-3ubuntu2.2) ... Setting up python3-importlib-metadata (1.5.0-1) ... Setting up python3-setuptools (45.2.0-1) ... Setting up python2.7 (2.7.18-1~20.04.3) ... Setting up libpython2-stdlib:amd64 (2.7.17-2ubuntu4) ... Setting up gpgsm (2.2.19-3ubuntu2.2) ... Setting up m4 (1.4.18-4) ... Setting up nodejs (16.19.0-deb-1nodesource1) ... Setting up python2 (2.7.17-2ubuntu4) ... Setting up dirmngr (2.2.19-3ubuntu2.2) ... Setting up libasan5:amd64 (9.4.0-1ubuntu1~20.04.1) ... Setting up python3-packaging (20.3-1) ... Setting up libpython3.9:amd64 (3.9.5-3ubuntu0~20.04.1) ... Setting up python3-software-properties (0.99.9.8) ... Setting up libpython3.8:amd64 (3.8.10-0ubuntu1~20.04.6) ... Setting up autoconf (2.69-11.1) ... Setting up python3-pluggy (0.13.0-2) ... Setting up gpg-wks-server (2.2.19-3ubuntu2.2) ... Setting up cpp-9 (9.4.0-1ubuntu1~20.04.1) ... Setting up libc6-dev:amd64 (2.31-0ubuntu9.9) ... Setting up python3.9 (3.9.5-3ubuntu0~20.04.1) ... Setting up binutils-x86-64-linux-gnu (2.34-6ubuntu1.4) ... Setting up automake (1:1.16.1-4ubuntu6) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gpg-wks-client (2.2.19-3ubuntu2.2) ... Setting up python-pkg-resources (44.0.0-2) ... Setting up python3-pytest (4.6.9-1) ... Setting up binutils (2.34-6ubuntu1.4) ... Setting up software-properties-common (0.99.9.8) ... Setting up dpkg-dev (1.19.7ubuntu3.2) ... Setting up libgcc-9-dev:amd64 (9.4.0-1ubuntu1~20.04.1) ... Setting up libexpat1-dev:amd64 (2.2.9-1ubuntu0.6) ... Setting up libpython3.8-dev:amd64 (3.8.10-0ubuntu1~20.04.6) ... Setting up intltool (0.51.0-5ubuntu1) ... Setting up zlib1g-dev:amd64 (1:1.2.11.dfsg-2ubuntu1.5) ... Setting up gnupg (2.2.19-3ubuntu2.2) ... Setting up python3.9-venv (3.9.5-3ubuntu0~20.04.1) ... Setting up python-distutils-extra (2.43) ... Setting up gcc-9 (9.4.0-1ubuntu1~20.04.1) ... Setting up libpython3-dev:amd64 (3.8.2-0ubuntu2) ... Setting up libstdc++-9-dev:amd64 (9.4.0-1ubuntu1~20.04.1) ... Setting up software-properties-gtk (0.99.9.8) ... Setting up libpython3.9-dev:amd64 (3.9.5-3ubuntu0~20.04.1) ... Setting up gcc (4:9.3.0-1ubuntu2) ... Setting up g++-9 (9.4.0-1ubuntu1~20.04.1) ... Setting up python3.8-dev (3.8.10-0ubuntu1~20.04.6) ... Setting up g++ (4:9.3.0-1ubuntu2) ... update-alternatives: using /usr/bin/g++ to provide /usr/bin/c++ (c++) in auto mode Setting up python3.9-dev (3.9.5-3ubuntu0~20.04.1) ... Setting up build-essential (12.8ubuntu1.1) ... Setting up python3-dev (3.8.2-0ubuntu2) ... Processing triggers for install-info (6.7.0.dfsg.2-5) ... Processing triggers for desktop-file-utils (0.24-1ubuntu3) ... Processing triggers for mime-support (3.64ubuntu1) ... Processing triggers for hicolor-icon-theme (0.17-2) ... Processing triggers for gnome-menus (3.36.0-1ubuntu1) ... Processing triggers for libglib2.0-0:amd64 (2.64.3-1~ubuntu20.04.1) ... Processing triggers for libc-bin (2.31-0ubuntu9) ... Processing triggers for man-db (2.9.1-1) ... Processing triggers for dbus (1.12.16-2ubuntu2.1) ... Processing triggers for shared-mime-info (1.15-1) ... Processing triggers for ca-certificates (20211016ubuntu0.20.04.1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done.
  • sudo -E npm install -g --unsafe-perm=true --allow-root npm

removed 14 packages, changed 75 packages, and audited 232 packages in 6s

14 packages are looking for funding run npm fund for details

found 0 vulnerabilities

  • sudo -E update-alternatives --install /usr/bin/python python /usr/bin/python3.9 2 update-alternatives: using /usr/bin/python3.9 to provide /usr/bin/python (python) in auto mode
  • sudo -E update-alternatives --install /usr/bin/python3 python3 /usr/bin/python3.9 2 update-alternatives: using /usr/bin/python3.9 to provide /usr/bin/python3 (python3) in auto mode
  • sudo -E update-alternatives --set python /usr/bin/python3.9
  • sudo -E update-alternatives --set python3 /usr/bin/python3.9
  • update-alternatives --query python Name: python Link: /usr/bin/python Status: manual Best: /usr/bin/python3.9 Value: /usr/bin/python3.9

Alternative: /usr/bin/python3.9 Priority: 2

  • export PATH=/usr/bin:/home/xzh/.conda/envs/CBS/bin:/opt/miniconda3/condabin:/opt/miniconda3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
  • PATH=/usr/bin:/home/xzh/.conda/envs/CBS/bin:/opt/miniconda3/condabin:/opt/miniconda3/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
  • ./pyright.sh --version Checking node version... Checking node_modules dir... Checking pyright exists... ...installing pyright

added 1 package in 6s done. pyright 1.1.271

  • ./install-orca.sh Installing the Plotly orca dependency for plotly figure export Reading package lists... Done Building dependency tree Reading state information... Done Some packages could not be installed. This may mean that you have requested an impossible situation or if you are using the unstable distribution that some required packages have not yet been created or been moved out of Incoming. The following information may help to resolve the situation:

The following packages have unmet dependencies: npm : Depends: nodejs (>= 6.11~) Depends: node-abbrev (>= 1.1.1~) but it is not going to be installed Depends: node-ajv but it is not going to be installed Depends: node-ansi but it is not going to be installed Depends: node-ansi-regex (>= 3.0~) but it is not going to be installed Depends: node-ansi-styles but it is not going to be installed Depends: node-ansistyles but it is not going to be installed Depends: node-aproba but it is not going to be installed Depends: node-archy (>= 1.0~) but it is not going to be installed Depends: node-are-we-there-yet but it is not going to be installed Depends: node-asap but it is not going to be installed Depends: node-asn1 but it is not going to be installed Depends: node-assert-plus but it is not going to be installed Depends: node-asynckit but it is not going to be installed Depends: node-aws4 but it is not going to be installed Depends: node-aws-sign2 but it is not going to be installed Depends: node-balanced-match but it is not going to be installed Depends: node-bcrypt-pbkdf but it is not going to be installed Depends: node-bl but it is not going to be installed Depends: node-bluebird but it is not going to be installed Depends: node-boxen but it is not going to be installed Depends: node-brace-expansion but it is not going to be installed Depends: node-builtin-modules but it is not going to be installed Depends: node-builtins but it is not going to be installed Depends: node-cacache but it is not going to be installed Depends: node-call-limit but it is not going to be installed Depends: node-camelcase but it is not going to be installed Depends: node-caseless but it is not going to be installed Depends: node-chalk but it is not going to be installed Depends: node-chownr but it is not going to be installed Depends: node-ci-info but it is not going to be installed Depends: node-cli-boxes but it is not going to be installed Depends: node-cliui but it is not going to be installed Depends: node-clone but it is not going to be installed Depends: node-co but it is not going to be installed Depends: node-color-convert but it is not going to be installed Depends: node-color-name but it is not going to be installed Depends: node-colors but it is not going to be installed Depends: node-columnify but it is not going to be installed Depends: node-combined-stream but it is not going to be installed Depends: node-concat-map but it is not going to be installed Depends: node-concat-stream but it is not going to be installed Depends: node-config-chain but it is not going to be installed Depends: node-configstore but it is not going to be installed Depends: node-console-control-strings but it is not going to be installed Depends: node-copy-concurrently but it is not going to be installed Depends: node-core-util-is but it is not going to be installed Depends: node-cross-spawn but it is not going to be installed Depends: node-crypto-random-string but it is not going to be installed Depends: node-cyclist but it is not going to be installed Depends: node-dashdash but it is not going to be installed Depends: node-debug but it is not going to be installed Depends: node-decamelize but it is not going to be installed Depends: node-deep-extend but it is not going to be installed Depends: node-defaults but it is not going to be installed Depends: node-define-properties but it is not going to be installed Depends: node-delayed-stream but it is not going to be installed Depends: node-delegates but it is not going to be installed Depends: node-detect-indent but it is not going to be installed Depends: node-detect-newline but it is not going to be installed Depends: node-dot-prop but it is not going to be installed Depends: node-duplexer3 but it is not going to be installed Depends: node-duplexify but it is not going to be installed Depends: node-ecc-jsbn but it is not going to be installed Depends: node-editor but it is not going to be installed Depends: node-encoding but it is not going to be installed Depends: node-end-of-stream but it is not going to be installed Depends: node-err-code but it is not going to be installed Depends: node-errno but it is not going to be installed Depends: node-es6-promise but it is not going to be installed Depends: node-escape-string-regexp but it is not going to be installed Depends: node-execa but it is not going to be installed Depends: node-extend but it is not going to be installed Depends: node-extsprintf but it is not going to be installed Depends: node-fast-deep-equal but it is not going to be installed Depends: node-find-up but it is not going to be installed Depends: node-flush-write-stream but it is not going to be installed Depends: node-forever-agent but it is not going to be installed Depends: node-form-data but it is not going to be installed Depends: node-from2 but it is not going to be installed Depends: node-fs.realpath but it is not going to be installed Depends: node-fs-vacuum but it is not going to be installed Depends: node-fs-write-stream-atomic but it is not going to be installed Depends: node-function-bind but it is not going to be installed Depends: node-gauge but it is not going to be installed Depends: node-genfun but it is not going to be installed Depends: node-get-caller-file but it is not going to be installed Depends: node-getpass but it is not going to be installed Depends: node-glob (>= 7.1.2~) but it is not going to be installed Depends: node-got but it is not going to be installed Depends: node-graceful-fs (>= 4.1.11~) but it is not going to be installed Depends: node-gyp (>= 3.6.2~) but it is not going to be installed Depends: node-har-schema but it is not going to be installed Depends: node-har-validator but it is not going to be installed Depends: node-has-flag but it is not going to be installed Depends: node-has-unicode but it is not going to be installed Depends: node-hosted-git-info (>= 2.6~) but it is not going to be installed Depends: node-http-signature but it is not going to be installed Depends: node-iconv-lite but it is not going to be installed Depends: node-iferr but it is not going to be installed Depends: node-import-lazy but it is not going to be installed Depends: node-imurmurhash but it is not going to be installed Depends: node-inflight but it is not going to be installed Depends: node-inherits (>= 2.0.3~) but it is not going to be installed Depends: node-ini (>= 1.3.5~) but it is not going to be installed Depends: node-invert-kv but it is not going to be installed Depends: node-ip but it is not going to be installed Depends: node-ip-regex but it is not going to be installed Depends: node-isarray but it is not going to be installed Depends: node-isexe but it is not going to be installed Depends: node-is-npm but it is not going to be installed Depends: node-is-obj but it is not going to be installed Depends: node-is-path-inside but it is not going to be installed Depends: node-is-retry-allowed but it is not going to be installed Depends: node-is-stream but it is not going to be installed Depends: node-isstream but it is not going to be installed Depends: node-is-typedarray but it is not going to be installed Depends: node-jsbn but it is not going to be installed Depends: node-jsonparse but it is not going to be installed Depends: node-json-parse-better-errors but it is not going to be installed Depends: node-json-schema but it is not going to be installed Depends: node-json-schema-traverse but it is not going to be installed Depends: node-jsonstream (>= 1.3.2~) but it is not going to be installed Depends: node-json-stringify-safe but it is not going to be installed Depends: node-jsprim but it is not going to be installed Depends: node-latest-version but it is not going to be installed Depends: node-lazy-property but it is not going to be installed Depends: node-lcid but it is not going to be installed Depends: node-libnpx but it is not going to be installed Depends: node-locate-path but it is not going to be installed Depends: node-lodash but it is not going to be installed Depends: node-lockfile (>= 1.0.3~) but it is not going to be installed Depends: node-lowercase-keys but it is not going to be installed Depends: node-lru-cache (>= 4.1.1~) but it is not going to be installed Depends: node-make-dir but it is not going to be installed Depends: node-mem but it is not going to be installed Depends: node-mime but it is not going to be installed Depends: node-mime-types but it is not going to be installed Depends: node-mimic-fn but it is not going to be installed Depends: node-minimatch but it is not going to be installed Depends: node-minimist but it is not going to be installed Depends: node-mississippi but it is not going to be installed Depends: node-mkdirp (>= 0.5.1~) but it is not going to be installed Depends: node-move-concurrently but it is not going to be installed Depends: node-ms but it is not going to be installed Depends: node-mute-stream but it is not going to be installed Depends: node-nopt but it is not going to be installed Depends: node-normalize-package-data (>= 2.4~) but it is not going to be installed Depends: node-npm-bundled but it is not going to be installed Depends: node-npm-package-arg (>= 6.1.1) but it is not going to be installed Depends: node-npmlog (>= 4.1.2~) but it is not going to be installed Depends: node-number-is-nan but it is not going to be installed Depends: node-oauth-sign but it is not going to be installed Depends: node-object-assign but it is not going to be installed Depends: node-once (>= 1.4~) but it is not going to be installed Depends: node-opener but it is not going to be installed Depends: node-osenv (>= 0.1.5~) but it is not going to be installed Depends: node-os-locale but it is not going to be installed Depends: node-os-tmpdir but it is not going to be installed Depends: node-package-json but it is not going to be installed Depends: node-parallel-transform but it is not going to be installed Depends: node-path-exists but it is not going to be installed Depends: node-path-is-absolute but it is not going to be installed Depends: node-path-is-inside but it is not going to be installed Depends: node-promise-inflight but it is not going to be installed Depends: node-promise-retry but it is not going to be installed Depends: node-promzard but it is not going to be installed Depends: node-performance-now but it is not going to be installed Depends: node-p-finally but it is not going to be installed Depends: node-p-is-promise but it is not going to be installed Depends: node-pify but it is not going to be installed Depends: node-p-limit but it is not going to be installed Depends: node-p-locate but it is not going to be installed Depends: node-prepend-http but it is not going to be installed Depends: node-process-nextick-args but it is not going to be installed Depends: node-proto-list but it is not going to be installed Depends: node-prr but it is not going to be installed Depends: node-pseudomap but it is not going to be installed Depends: node-psl but it is not going to be installed Depends: node-pump but it is not going to be installed Depends: node-pumpify but it is not going to be installed Depends: node-punycode but it is not going to be installed Depends: node-qs but it is not going to be installed Depends: node-qw but it is not going to be installed Depends: node-rc but it is not going to be installed Depends: node-read (>= 1.0.7~) but it is not going to be installed Depends: node-readable-stream but it is not going to be installed Depends: node-read-package-json (>= 2.0.13~) but it is not going to be installed Depends: node-registry-auth-token but it is not going to be installed Depends: node-registry-url but it is not going to be installed Depends: node-request (>= 2.83~) but it is not going to be installed Depends: node-require-main-filename but it is not going to be installed Depends: node-require-directory but it is not going to be installed Depends: node-resolve-from (>= 4.0~) but it is not going to be installed Depends: node-retry (>= 0.10.1~) but it is not going to be installed Depends: node-rimraf (>= 2.6.2~) but it is not going to be installed Depends: node-run-queue but it is not going to be installed Depends: node-safe-buffer but it is not going to be installed Depends: node-semver (>= 5.5~) but it is not going to be installed Depends: node-set-blocking but it is not going to be installed Depends: node-sha (>= 2.0.1~) but it is not going to be installed Depends: node-shebang-command but it is not going to be installed Depends: node-shebang-regex but it is not going to be installed Depends: node-signal-exit but it is not going to be installed Depends: node-slide (>= 1.1.6~) but it is not going to be installed Depends: node-sorted-object but it is not going to be installed Depends: node-slash but it is not going to be installed Depends: node-semver-diff but it is not going to be installed Depends: node-spdx-correct but it is not going to be installed Depends: node-spdx-exceptions but it is not going to be installed Depends: node-spdx-expression-parse but it is not going to be installed Depends: node-spdx-license-ids but it is not going to be installed Depends: node-sshpk but it is not going to be installed Depends: node-ssri but it is not going to be installed Depends: node-stream-each but it is not going to be installed Depends: node-stream-iterate but it is not going to be installed Depends: node-stream-shift but it is not going to be installed Depends: node-strict-uri-encode but it is not going to be installed Depends: node-string-decoder but it is not going to be installed Depends: node-string-width but it is not going to be installed Depends: node-strip-ansi (>= 4.0~) but it is not going to be installed Depends: node-strip-json-comments but it is not going to be installed Depends: node-strip-eof but it is not going to be installed Depends: node-supports-color but it is not going to be installed Depends: node-tar (>= 4.4~) but it is not going to be installed Depends: node-term-size but it is not going to be installed Depends: node-text-table but it is not going to be installed Depends: node-through but it is not going to be installed Depends: node-through2 but it is not going to be installed Depends: node-timed-out but it is not going to be installed Depends: node-tough-cookie but it is not going to be installed Depends: node-tunnel-agent but it is not going to be installed Depends: node-tweetnacl but it is not going to be installed Depends: node-typedarray but it is not going to be installed Depends: node-uid-number but it is not going to be installed Depends: node-unique-filename but it is not going to be installed Depends: node-unique-string but it is not going to be installed Depends: node-unpipe but it is not going to be installed Depends: node-url-parse-lax but it is not going to be installed Depends: node-util-deprecate but it is not going to be installed Depends: node-uuid but it is not going to be installed Depends: node-validate-npm-package-name but it is not going to be installed Depends: node-verror but it is not going to be installed Depends: node-which (>= 1.3~) but it is not going to be installed Depends: node-which-module but it is not going to be installed Depends: node-wide-align but it is not going to be installed Depends: node-widest-line but it is not going to be installed Depends: node-wrap-ansi but it is not going to be installed Depends: node-wrappy but it is not going to be installed Depends: node-wcwidth.js but it is not going to be installed Depends: node-write-file-atomic but it is not going to be installed Depends: node-xdg-basedir but it is not going to be installed Depends: node-xtend but it is not going to be installed Depends: node-yargs but it is not going to be installed Depends: node-yargs-parser but it is not going to be installed Depends: node-yallist but it is not going to be installed Depends: node-y18n but it is not going to be installed E: Unable to correct problems, you have held broken packages. npm WARN deprecated har-validator@5.1.5: this library is no longer supported npm WARN deprecated w3c-hr-time@1.0.2: Use your platform's native performance.now() and performance.timeOrigin. npm WARN deprecated request-promise-native@1.0.9: request-promise-native has been deprecated because it extends the now deprecated request package, see request/request#3142 npm WARN deprecated left-pad@1.3.0: use String.prototype.padStart() npm WARN deprecated uuid@3.4.0: Please upgrade to version 7 or higher. Older versions may use Math.random() in certain circumstances, which is known to be problematic. See https://v8.dev/blog/math-random for details. npm WARN deprecated request@2.88.2: request has been deprecated, see request/request#3142 npm WARN deprecated har-validator@5.1.5: this library is no longer supported npm WARN deprecated uuid@3.4.0: Please upgrade to version 7 or higher. Older versions may use Math.random() in certain circumstances, which is known to be problematic. See https://v8.dev/blog/math-random for details. npm WARN deprecated request@2.88.2: request has been deprecated, see request/request#3142 npm WARN deprecated electron-download@4.1.1: Please use @electron/get moving forward. npm ERR! code EEXIST npm ERR! path /usr/bin/orca npm ERR! EEXIST: file already exists npm ERR! File exists: /usr/bin/orca npm ERR! Remove the existing file and try again, or run npm npm ERR! with --force to overwrite files recklessly.

npm ERR! A complete log of this run can be found in: npm ERR! /home/xzh/.npm/_logs/2022-12-21T12_39_06_767Z-debug-0.log (CBS) xzh@xzh-virtual-machine:~/Desktop/CyberBattleSim$ npm audit fix --force npm WARN using --force Recommended protections disabled. npm ERR! code ENOLOCK npm ERR! audit This command requires an existing lockfile. npm ERR! audit Try creating one first with: npm i --package-lock-only npm ERR! audit Original error: loadVirtual requires existing shrinkwrap file

npm ERR! A complete log of this run can be found in: npm ERR! /home/xzh/.npm/_logs/2022-12-21T12_40_17_566Z-debug-0.log

blumu commented 1 year ago

@Zihaoxie Were you able to fix the issue in the end?