2024-05-09 13:01:52 | WARNING | root | The OGB package is out of date. Your version is 1.3.2, while the latest version is 1.3.6. Traceback (most recent call last): File "/home/zzy/local/anaconda3/envs/graphormer2/bin/fairseq-train", line 8, in <module> sys.exit(cli_main()) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq_cli/train.py", line 541, in cli_main parser = options.get_training_parser() File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/options.py", line 38, in get_training_parser parser = get_parser("Trainer", default_task) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/options.py", line 234, in get_parser utils.import_user_module(usr_args) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/utils.py", line 497, in import_user_module import_tasks(tasks_path, f"{module_name}.tasks") File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/tasks/__init__.py", line 117, in import_tasks importlib.import_module(namespace + "." + task_name) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/importlib/__init__.py", line 127, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "<frozen importlib._bootstrap>", line 1030, in _gcd_import File "<frozen importlib._bootstrap>", line 1007, in _find_and_load File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked File "<frozen importlib._bootstrap>", line 680, in _load_unlocked File "<frozen importlib._bootstrap_external>", line 850, in exec_module File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed File "/home/zzy/code/Graphormer/graphormer/tasks/is2re.py", line 23, in <module> from ..data.dataset import EpochShuffleDataset File "/home/zzy/code/Graphormer/graphormer/data/dataset.py", line 9, in <module> from .wrapper import MyPygGraphPropPredDataset File "/home/zzy/code/Graphormer/graphormer/data/wrapper.py", line 7, in <module> from ogb.graphproppred import PygGraphPropPredDataset File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/ogb/graphproppred/__init__.py", line 10, in <module> from .dataset_dgl import DglGraphPropPredDataset File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/ogb/graphproppred/dataset_dgl.py", line 6, in <module> from dgl.data.utils import load_graphs, save_graphs, Subset File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/dgl/__init__.py", line 13, in <module> from .backend import load_backend, backend_name File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/dgl/backend/__init__.py", line 107, in <module> load_backend(get_preferred_backend()) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/dgl/backend/__init__.py", line 95, in get_preferred_backend config_dict = json.load(config_file) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/json/__init__.py", line 293, in load return loads(fp.read(), File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/json/__init__.py", line 346, in loads return _default_decoder.decode(s) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/json/decoder.py", line 340, in decode raise JSONDecodeError("Extra data", s, end) json.decoder.JSONDecodeError: Extra data: line 2 column 1 (char 23)
A-generous-miser
commented
1 month ago
2024-05-09 13:01:52 | WARNING | root | The OGB package is out of date. Your version is 1.3.2, while the latest version is 1.3.6. Traceback (most recent call last): File "/home/zzy/local/anaconda3/envs/graphormer2/bin/fairseq-train", line 8, in <module> sys.exit(cli_main()) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq_cli/train.py", line 541, in cli_main parser = options.get_training_parser() File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/options.py", line 38, in get_training_parser parser = get_parser("Trainer", default_task) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/options.py", line 234, in get_parser utils.import_user_module(usr_args) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/utils.py", line 497, in import_user_module import_tasks(tasks_path, f"{module_name}.tasks") File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/fairseq/tasks/__init__.py", line 117, in import_tasks importlib.import_module(namespace + "." + task_name) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/importlib/__init__.py", line 127, in import_module return _bootstrap._gcd_import(name[level:], package, level) File "<frozen importlib._bootstrap>", line 1030, in _gcd_import File "<frozen importlib._bootstrap>", line 1007, in _find_and_load File "<frozen importlib._bootstrap>", line 986, in _find_and_load_unlocked File "<frozen importlib._bootstrap>", line 680, in _load_unlocked File "<frozen importlib._bootstrap_external>", line 850, in exec_module File "<frozen importlib._bootstrap>", line 228, in _call_with_frames_removed File "/home/zzy/code/Graphormer/graphormer/tasks/is2re.py", line 23, in <module> from ..data.dataset import EpochShuffleDataset File "/home/zzy/code/Graphormer/graphormer/data/dataset.py", line 9, in <module> from .wrapper import MyPygGraphPropPredDataset File "/home/zzy/code/Graphormer/graphormer/data/wrapper.py", line 7, in <module> from ogb.graphproppred import PygGraphPropPredDataset File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/ogb/graphproppred/__init__.py", line 10, in <module> from .dataset_dgl import DglGraphPropPredDataset File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/ogb/graphproppred/dataset_dgl.py", line 6, in <module> from dgl.data.utils import load_graphs, save_graphs, Subset File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/dgl/__init__.py", line 13, in <module> from .backend import load_backend, backend_name File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/dgl/backend/__init__.py", line 107, in <module> load_backend(get_preferred_backend()) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/site-packages/dgl/backend/__init__.py", line 95, in get_preferred_backend config_dict = json.load(config_file) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/json/__init__.py", line 293, in load return loads(fp.read(), File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/json/__init__.py", line 346, in loads return _default_decoder.decode(s) File "/home/zzy/local/anaconda3/envs/graphormer2/lib/python3.9/json/decoder.py", line 340, in decode raise JSONDecodeError("Extra data", s, end) json.decoder.JSONDecodeError: Extra data: line 2 column 1 (char 23)what's the problem？