Open shakerxuek opened 3 years ago
You can first inspect the format (keys, shapes, data types) of our provided h5 files and then create your dataset following our format. However, you need to change a lot of things other than the dataset to work with 2D images.
Thanks for your reply, I tried to stacked my 2D ultrasound image and convert them into 3D DICOM file. I have create h5 file as training set following you format, and I noticed that the h5 files used for testing purpose (like lits_val.h5) have 3 members in each group while the training set has 1. What is the purpose of this structure?
The validation set also contains segmentation mask (to evaluate the Dice score) and landmarks (to evaluate the landmark distance) for testing purpose.
Dear developer,
Thank you for your time to read my inquiries. I managed to use two-dimensional ultrasound image as dataset to get weights. And I encountered several problems.
The proposed method to handle input is introduceing h5 file and json file. When I tried to build dataset by creating h5 file with jpg ultrasound image,it causes various errors. I understand that is because the proper input format is dicom. But what should I do to create h5 file as dataset with two-dimensional image? How did you create h5 file as dataset?
Thank you in advance, I am looking forward to receive your response.