Error with IDR inpainting with Evodiff-MSA

microsoft / evodiff

Generation of protein sequences and evolutionary alignments via discrete diffusion models

MIT License

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Error with IDR inpainting with Evodiff-MSA #27

Closed ZhiYeG closed 3 months ago

ZhiYeG commented 1 year ago

Hi, I try to run script python evodiff/generate-msa.py --model-type msa_oa_dm_maxsub --batch-size 1 --n-sequences 64 --n-sequences 256 --subsampling MaxHamming --start-query But it seems couldn't find this file human_idr_alignments/human_protein_alignments. Also, could put one simple example in evodiff.ipynb for inpainting IDRs with Evodiff-MSA? Thanks in advance

sarahalamdari commented 3 months ago

These have been added in PR #41