Rats is a collection of tools to help researchers define and run experiments. It is designed to be a modular and extensible framework currently supporting building and running pipelines, integrating configs and services.
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:arrow_up: dep-bump(deps): Bump the package-dependencies group across 1 directory with 11 updates #265
Resolve DeprecationWarnings when extracting twine metadata. ([#1115](https://github.com/pypa/twine/issues/1115) <https://github.com/pypa/twine/issues/1115>_)
Fix bug for Repository URLs with auth where the port was lost. When attempting
to prevent printing authentication credentials in URLs provided with username
and password, we did not properly handle the case where the URL also contains
a port (when reconstructing the URL). This is now handled and tested to
ensure no regressions. (#fix-repo-urls-with-auth-and-port <https://github.com/pypa/twine/issues/fix-repo-urls-with-auth-and-port>_)
Exclusion patterns can now be multi-line, thanks to Daniel Diniz <pull 1807_>. This enables many interesting exclusion use-cases, including those
requested in issues 118 <issue 118_> (entire files), 996 <issue 996_>_ (multiple lines only when appearing together), 1741 <issue 1741_>_ (remainder of a function), and 1803 <issue 1803_>_
(arbitrary sequence of marked lines). See the :ref:multi_line_exclude
section of the docs for more details and examples.
The JSON report now includes per-function and per-class coverage information.
Thanks to Daniel Diniz <pull 1809_>_ for getting the work started. This
closes issue 1793_ and issue 1532_.
Fixed an incorrect calculation of "(no class)" lines in the HTML classes
report.
If you attempt to combine statement coverage data with branch coverage data,
coverage.py used to fail with the message "Can't combine arc data with line
data" or its reverse, "Can't combine line data with arc data." These
messages used internal terminology, making it hard for people to understand
the problem. They are now changed to mention "branch coverage data" and
"statement coverage data."
Fixed a minor branch coverage problem with wildcard match/case cases using
names or guard clauses.
Started testing on 3.13 free-threading (nogil) builds of Python. I'm not
claiming full support yet. Closes issue 1799_.
#12652: Resolve regression [conda]{.title-ref} environments where no longer being automatically detected.
-- by RonnyPfannschmidt{.interpreted-text role="user"}
8.3.1
pytest 8.3.1 (2024-07-20)
The 8.3.0 release failed to include the change notes and docs for the release. This patch release remedies this. There are no other changes.
8.3.0
pytest 8.3.0 (2024-07-20)
New features
#12231: Added [--xfail-tb]{.title-ref} flag, which turns on traceback output for XFAIL results.
If the [--xfail-tb]{.title-ref} flag is not given, tracebacks for XFAIL results are NOT shown.
The style of traceback for XFAIL is set with [--tb]{.title-ref}, and can be [auto|long|short|line|native|no]{.title-ref}.
Note: Even if you have [--xfail-tb]{.title-ref} set, you won't see them if [--tb=no]{.title-ref}.
Some history:
With pytest 8.0, [-rx]{.title-ref} or [-ra]{.title-ref} would not only turn on summary reports for xfail, but also report the tracebacks for xfail results. This caused issues with some projects that utilize xfail, but don't want to see all of the xfail tracebacks.
This change detaches xfail tracebacks from [-rx]{.title-ref}, and now we turn on xfail tracebacks with [--xfail-tb]{.title-ref}. With this, the default [-rx]{.title-ref}/ [-ra]{.title-ref} behavior is identical to pre-8.0 with respect to xfail tracebacks. While this is a behavior change, it brings default behavior back to pre-8.0.0 behavior, which ultimately was considered the better course of action.
#12281: Added support for keyword matching in marker expressions.
Now tests can be selected by marker keyword arguments.
Supported values are int{.interpreted-text role="class"}, (unescaped) str{.interpreted-text role="class"}, bool{.interpreted-text role="class"} & None{.interpreted-text role="data"}.
See marker examples <marker_keyword_expression_example>{.interpreted-text role="ref"} for more information.
-- by lovetheguitar{.interpreted-text role="user"}
#12567: Added --no-fold-skipped command line option.
If this option is set, then skipped tests in short summary are no longer grouped
by reason but all tests are printed individually with their nodeid in the same
way as other statuses.
Restore the tests command and deprecate access to the module. (#4519) (#4520)
v72.0.0
Deprecations and Removals
The test command has been removed. Users relying on 'setup.py test' will need to migrate to another test runner or pin setuptools before this version. (#931)
v71.1.0
Features
Added return types to typed public functions -- by :user:Avasam
Marked pkg_resources as py.typed -- by :user:Avasam (#4409)
#12096: Warn when files are overwritten in the build directory.
Patch by Adam Turner and Bénédikt Tran.
#12620: Ensure that old-style object description options are respected.
Patch by Adam Turner.
#12601, #12625: Support callable objects in :py:class:~typing.Annotated type
metadata in the Python domain.
Patch by Adam Turner.
#12601, #12622: Resolve :py:class:~typing.Annotated warnings with
sphinx.ext.autodoc,
especially when using :mod:dataclasses as type metadata.
Patch by Adam Turner.
#12589, #12626: autosummary: Fix warnings with :rst:role:!autolink.
Patch by Adam Turner.
Release 7.4.6 (released Jul 18, 2024)
Bugs fixed
#12589, #9743, #12609: autosummary: Do not add the package prefix when
generating autosummary directives for modules within a package.
Patch by Adam Turner.
#12613: Reduce log severity for ambiguity detection during inventory loading.
Patch by James Addison.
Release 7.4.5 (released Jul 16, 2024)
Bugs fixed
#12593, #12600: Revert coercing the type of selected :confval:html_sidebars
values to a list.
Log an error message when string values are detected.
Patch by Adam Turner.
#12594: LaTeX: since 7.4.0, :rst:dir:seealso and other "light" admonitions
now break PDF builds if they contain a :dudir:figure directive; and also
if they are contained in a table cell (rendered by tabulary).
Patch by Jean-François B.
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Bumps the package-dependencies group with 11 updates in the /rats-devtools directory:
5.1.0
5.1.1
7.5.3
7.6.0
1.1.367
1.1.373
8.2.2
8.3.2
70.3.0
72.1.0
0.4.9
0.5.5
2.9.2
2.9.3
9.5.27
9.5.30
10.8.1
10.9
7.3.7
7.4.7
2.1.1
2.2.3
Updates
twine
from 5.1.0 to 5.1.1Changelog
Sourced from twine's changelog.
Commits
e29791d
Prepare for v5.1.1 (#1114)f213ede
fix: Retrieve metadata correctly from importlib_metadata (#1115)6fbf880
Merge pull request #1112 from pypa/bug/11113eb9121
Remove extra line from changelog entry0191f0c
Preserve ports when munging repository URLsc588793
Merge pull request #1110 from DimitriPapadopoulos/principle1fdc197
Fix a couple typos13b07b6
Merge pull request #1109 from pypa/dependabot/github_actions/actions/checkout...a3e8373
build(deps): bump actions/checkout from 4.1.5 to 4.1.6Updates
coverage
from 7.5.3 to 7.6.0Changelog
Sourced from coverage's changelog.
... (truncated)
Commits
59a3cd7
docs: sample HTML for 7.6.07f27fa7
docs: prep for 7.6.06a268b0
docs: issues closed by the json region reporting5bfe9e7
chore: bump actions/setup-python from 5.1.0 to 5.1.1 (#1814)ab609ef
docs: mention json region reporting in the changes92d96b9
fix: json report needs 'no class' and 'no function' alsoe47e7e7
refactor: move duplicate code into methods3d6be2b
fix: json format should bump for regionsa9992d2
test: add a test of json regions with branches8b89764
test: json expectations should have explicit format numberUpdates
pyright
from 1.1.367 to 1.1.373Commits
5d315f9
[pyright updated to 1.1.373] Update Version (#284)59a4bdf
[pyright updated to 1.1.372] Update Version (#283)ca00a93
[pyright updated to 1.1.371] Update Version (#282)14f3e58
Pyright NPM Package update to 1.1.370 (#281)804dafb
chore(internal): loosen twine dependency903dbc6
chore(ci): enable workflow_dispatch for releasing82d28c7
chore(internal): pin twine dependencyffa917f
[pyright updated to 1.1.369] Update Version (#279)604a0a0
[pyright updated to 1.1.368] Update Version (#278)Updates
pytest
from 8.2.2 to 8.3.2Release notes
Sourced from pytest's releases.
... (truncated)
Commits
bbcec9c
Prepare release version 8.3.278fe8b6
Merge pull request #12657 from pytest-dev/patchback/backports/8.3.x/6c806b499...238bad2
Merge pull request #12656 from RonnyPfannschmidt/fix-12652-detect-conda-envae6034a
Merge pull request #12641 from pytest-dev/patchback/backports/8.3.x/c03989cee...31337ab
Merge pull request #12640 from pytest-dev/update-userca3070b
Merge pull request #12637 from pytest-dev/release-8.3.1de98446
Prepare release version 8.3.1bd0a042
Merge pull request #12636 from pytest-dev/update-release-notes664325b
doc/changelog: update 8.3.0 notes19d225d
Merge pull request #12635 from pytest-dev/release-8.3.0Updates
setuptools
from 70.3.0 to 72.1.0Changelog
Sourced from setuptools's changelog.
... (truncated)
Commits
441799f
Bump version: 72.0.0 → 72.1.059aff44
Merge pull request #4522 from pypa/feature/graceful-drop-testsc437aaa
Restore the tests command and deprecate access to the module.a6726b9
Add celery and requests to the packages that test integration. Ref #45205e1b3c4
Bump version: 71.1.0 → 72.0.04c0b9f3
Merge pull request #4458 from pypa/debt/remove-test-commandbe8e3a0
Merge pull request #4507 from pypa/docs/4483-install-core-extra99d2c72
Add documentation clarifying how to reliably install setuptools with its depe...63c89f9
👹 Feed the hobgoblins (delint).c405ac1
Merge branch 'main' into debt/remove-test-commandUpdates
ruff
from 0.4.9 to 0.5.5Release notes
Sourced from ruff's releases.
... (truncated)
Changelog
Sourced from ruff's changelog.
... (truncated)
Commits
fc16d8d
Bump version to 0.5.5 (#12510)175e5d7
Add missing traceback line inf-string-in-exception
docstring. (#12508)c03f257
Add note about the breaking change innvim-lspconfig
(#12507)6bbb4a2
Add setup docs for Zed editor (#12501)2ce3e3a
Fix the search path tests on MacOS (#12503)2a64ccc
Avoid applyingignore-names
toself
andcls
function names (#12497)928ffd6
IgnoreNPY201
insideexcept
blocks for compatibility with older numpy ver...e52be09
[red-knot] Improve validation for search paths (#12376)8890735
[flake8-bugbear] Allow singleton tuples with starred expressions in B013 (#12...eac965e
[red-knot] Watch search paths (#12407)Updates
mkdocs-awesome-pages-plugin
from 2.9.2 to 2.9.3Release notes
Sourced from mkdocs-awesome-pages-plugin's releases.
Commits
894bbe8
Bump version to 2.9.335cd23d
Add support for mkdocs 1.6.0f12694c
Install flake87d32a2e
Install isort9f953f7
Update dev dependencies79a9414
Drop support for python 3.8 and update poetry2ff8819
fix filename in example in README.md85eba1a
Lock poetry versionUpdates
mkdocs-material
from 9.5.27 to 9.5.30Release notes
Sourced from mkdocs-material's releases.
Changelog
Sourced from mkdocs-material's changelog.
... (truncated)
Commits
557a3d5
Prepare 9.5.30 releasea798a0d
Fixed link in comment914bed2
Updated dependencies906e966
Fixed navigation icons disappearing on hover in Safari6b13c56
Fixed blog readtime calculation to ignore non-content text (#7370)4f8081c
Prepare 9.5.29 release33452c9
Fixed annotations in figure captions672c403
Documentation (#7361)c7c8fcb
Updated Galician translations5d1f77c
DocumentationUpdates
pymdown-extensions
from 10.8.1 to 10.9Release notes
Sourced from pymdown-extensions's releases.
Commits
cd7c704
Support Python 3.13 (#2422)72108f0
Bump version368aedc
Remove unnecessary logic6b1041f
Update JS doc deps973301b
Ignore perceived lint issue (#2421)ef38568
fix: allow downloading when content-length header is missing (#2413)4ad2baf
Update JS doc deps6ed6826
Remove polyfill requirements for Mathjax and do not recommend it in docsc8856a3
really drop python<=3.7 support (#2391)f1e2fad
Update tests to account for latest Ruff and Pygments updates (#2379)Updates
sphinx
from 7.3.7 to 7.4.7Release notes
Sourced from sphinx's releases.
Changelog
Sourced from sphinx's changelog.
... (truncated)
Commits
0d912c8
Bump to 7.4.7 finalbbc97e0
autosummary: Filter invalid import prefixes inautolink
(#12626)6c486a5
Fix detecting file changes for the overwritten file warning (#12627)2bd973e
autodoc: Fix warnings with dataclasses inAnnotated
metadata (#12622)dd77f85
Support callables inAnnotated
types (#12625)1ed4ca7
Marktest_build_manpage
as XFAIL following changes in Docutils mastercd8ce07
Update message catalogues following reverted commitsc6cd25f
Partially revert "Update message catalogues (#11626)"fa2ba7d
Partially Revert "[bot]: Update message catalogues (#12563)"e439c6f
Ensure that old-style object description options are respected (#12620)Updates
sphinx-autodoc-typehints
from 2.1.1 to 2.2.3Release notes
Sourced from sphinx-autodoc-typehints's releases.
Commits
d38f8f7
[pre-commit.ci] pre-commit autoupdate (#466)a427536
Fix rendering when docstring starst with a directive (#468)fdad0d7
Fix mypy errors due to unneeded type ignores (#469)df66980
[pre-commit.ci] pre-commit autoupdate (#465)ea99f28
Fix for Issue #384: typehints_defaults = "braces-after" fails for a multiline...0435d07
Fix issue #462 and another alias processing bug (#463)fb240ea
Support autodoc_type_aliases configuration (#459)41b2900
Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.9.0 (#460)047ac44
[pre-commit.ci] pre-commit autoupdate (#461)fd0a0c6
[pre-commit.ci] pre-commit autoupdate (#458)Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting
@dependabot rebase
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