search

microsoft / tf-gnn-samples

TensorFlow implementations of Graph Neural Networks
MIT License
914 stars 229 forks source link

Some questions about running. #7

Closed HuantWang closed 4 years ago

HuantWang commented 4 years ago

Hello, I have some questions when running your code: For PPI data, I downloaded your ppi.zip, which has .npy file. when Runing code， ValueError: File suffix must be .json, .json.gz, .pkl or .pkl.gz: data / ppi \ train_feats.npy How can I fix it ?

HuantWang commented 4 years ago

Now, I load it using np.load

mmjb commented 4 years ago

I believe the error message here is wrong (it comes from https://github.com/microsoft/dpu-utils/blob/master/python/dpu_utils/utils/richpath.py#L189, but .npy is actually supported in the two lines above).

To debug this further, can you include the exact invocation of train.py you tried, show the content of data/ppi (either using ls or dir) and tell me what platform you are using? The \ in the path looks like you are on Windows? Can you also check what version of dpu-utils you have installed (with pip show dpu-utils)?

HuantWang commented 4 years ago

Thanks for your helping！ When I checked the version of dpu-utils, I found that it did not meet the requirements of require.txt. After Updating the version and then solve the problem. I debug under windows, thank you very much for your help!