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VS Code Jupyter extension
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Can't start IRkernel due to unnecessary quotes when launching the kernel via the CLI #11374

Closed MiliJhM closed 1 year ago

MiliJhM commented 2 years ago

Applies To

What happened?

I try to use R in Jupyter with IRkernel, and it works well on my Jupyter lab. But when I tried to use VSCode to open R .ipynb files, I got this: image Seems that jupyter-vscode can't start this customized kernel correctly. I tried to reinstall the extension or change to pre-release version, but all failed. In my view, the problem seems to be a wrong format of string? I tried to fix it in the specFile, but can't solve the problem.

VS Code Version

1.71.0

Jupyter Extension Version

v2022.8.1002431955 & 2022.9.1002511105

Jupyter logs

error 11:42:23.768: Error in execution (get message for cell) o [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file 'r'"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-24568JN5dWQkG77fG.json"'': Invalid argument
Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details.
    at ChildProcess.<anonymous> (c:\Users\Ma Jiahao\.vscode\extensions\ms-toolsai.jupyter-2022.9.1002511105\out\extension.node.js:2:2177745)
    at ChildProcess.emit (node:events:538:35)
    at Process.ChildProcess._handle.onexit (node:internal/child_process:291:12) {
  category: 'kerneldied',
  kernelConnectionMetadata: {
    kind: 'startUsingLocalKernelSpec',
    kernelSpec: {
      specFile: '***\\kernel.json',
      name: 'ir',
      argv: [Array],
      language: 'R',
      executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R',
      display_name: 'R',
      metadata: [Object]
    },
    id: ".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#r'{connection_file}'"
  },
  exitCode: 1,
  stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' +
    'Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' +
    'In addition: Warning message:\r\n' +
    'In open.connection(con, "rb") :\r\n' +
    `  cannot open file 'r'"c:\\Users\\Ma Jiahao\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-24568JN5dWQkG77fG.json"'': Invalid argument\r\n` +
    ### original:   '"***\\kernel-v2-24568JN5dWQkG77fG.json"'': Invalid argument\r\n`'"
    'Execution halted\r\n'
}

Coding Language and Runtime Version

R 4.2.1 with IRkernel 1.3

Language Extension Version (if applicable)

No response

Anaconda Version (if applicable)

No response

Running Jupyter locally or remotely?

Local

DonJayamanne commented 2 years ago

Thanks for filing this issue & I'm sorry you're running into this issue. Please could you send the initial section of the logs as well. Try reloading VS Code, run the kernel and capure the logs.

MiliJhM commented 2 years ago

Thanks for your concern and below are more completed logs.

Jupyter logs


Visual Studio Code (1.71.0, undefined, desktop)
Jupyter Extension Version: 2022.8.1002431955.
Python Extension Version: 2022.14.0.
Workspace folder d:\JupyterNotebookWorkp
info 19:17:42.920: ZMQ install verified.
User belongs to experiment group 'jupyterTestcf'
User belongs to experiment group 'jupyterEnhancedDataViewer'
info 19:17:43.362: LSP Notebooks experiment is enabled
info 19:17:43.392: Experiment status for python is {"enabled":true,"optInto":[],"optOutFrom":[]}
info 19:17:43.456: Preferred Remote kernel for d:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb is undefined
info 19:17:43.456: Find preferred kernel for d:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb with metadata {"kernelspec":{"display_name":"R","language":"R","name":"ir"},"language_info":{"codemirror_mode":"r","file_extension":".r","mimetype":"text/x-r-source","name":"R","pygments_lexer":"r","version":"4.2.1"}} & preferred interpreter 
info 19:17:43.457: Preferred Remote kernel for d:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb is undefined
info 19:17:43.457: Preferred kernel .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#r'{connection_file}' is exact match or top match for non python kernels, (false, undefined, true, true)
info 19:17:43.458: PreferredConnection: .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#r'{connection_file}' found for NotebookDocument: d:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb
info 19:17:46.780: Process Execution: > d:\Miniconda3\envs\seuratenv\python.exe -m pip list
> d:\Miniconda3\envs\seuratenv\python.exe -m pip list
info 19:17:47.839: Preferred Remote kernel for d:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb is undefined
info 19:17:54.831: Execute Cell 2 d:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb
info 19:17:54.831: Dispose Kernel 'd:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb' associated with 'd:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb'
info 19:17:54.832: Starting Jupyter Session id = 'startUsingLocalKernelSpec:.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' for 'd:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb' (disableUI=false)
info 19:17:54.832: Creating raw notebook for resource 'd:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb'
info 19:17:54.832: Computing working directory for resource 'd:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb'
info 19:17:54.834: Starting raw kernel 'R' for interpreter 
info 19:17:54.860: Kernel launching with ports 9000,9001,9002,9003,9004. Start port is 9000
info 19:17:54.866: Launching Raw Kernel & not daemon R # C:/PROGRA~1/R/R-42~1.1/bin/x64/R
info 19:17:54.866: No custom variables nor do we have a conda environment
info 19:17:54.871: Process Execution: > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"
> C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"
info 19:17:54.871: Process Execution: cwd: d:\JupyterNotebookWorkp\Genome Data Analyse
cwd: d:\JupyterNotebookWorkp\Genome Data Analyse
warn 19:17:55.646: StdErr from Kernel Process Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:

warn 19:17:55.646: StdErr from Kernel Process In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted

error 19:17:55.723: Disposing kernel process due to an error o [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details.
    at ChildProcess.<anonymous> (c:\Users\Ma Jiahao\.vscode\extensions\ms-toolsai.jupyter-2022.8.1002431955\out\extension.node.js:2:2334688)
    at ChildProcess.emit (node:events:538:35)
    at Process.ChildProcess._handle.onexit (node:internal/child_process:291:12) {
  category: 'kerneldied',
  kernelConnectionMetadata: {
    kind: 'startUsingLocalKernelSpec',
    kernelSpec: {
      specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json',
      interpreterPath: undefined,
      isRegisteredByVSC: undefined,
      name: 'ir',
      argv: [Array],
      language: 'R',
      executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R',
      display_name: 'R',
      metadata: [Object],
      env: undefined,
      interrupt_mode: undefined
    },
    interpreter: undefined,
    id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}'
  },
  exitCode: 1,
  stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' +
    'Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' +
    'In addition: Warning message:\r\n' +
    'In open.connection(con, "rb") :\r\n' +
    `  cannot open file '"c:\\Users\\Ma Jiahao\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument\r\n` +
    'Execution halted\r\n'
}
error 19:17:55.724: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted

error 19:17:55.727: Failed to connect raw kernel session: Error: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details.
warn 19:17:55.728: Error occurred while trying to start the kernel, options.disableUI=false o [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details.
    at ChildProcess.<anonymous> (c:\Users\Ma Jiahao\.vscode\extensions\ms-toolsai.jupyter-2022.8.1002431955\out\extension.node.js:2:2334688)
    at ChildProcess.emit (node:events:538:35)
    at Process.ChildProcess._handle.onexit (node:internal/child_process:291:12) {
  category: 'kerneldied',
  kernelConnectionMetadata: {
    kind: 'startUsingLocalKernelSpec',
    kernelSpec: {
      specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json',
      interpreterPath: undefined,
      isRegisteredByVSC: undefined,
      name: 'ir',
      argv: [Array],
      language: 'R',
      executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R',
      display_name: 'R',
      metadata: [Object],
      env: undefined,
      interrupt_mode: undefined
    },
    interpreter: undefined,
    id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}'
  },
  exitCode: 1,
  stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' +
    'Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' +
    'In addition: Warning message:\r\n' +
    'In open.connection(con, "rb") :\r\n' +
    `  cannot open file '"c:\\Users\\Ma Jiahao\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument\r\n` +
    'Execution halted\r\n'
}
warn 19:17:55.729: Kernel Error, context = start o [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details.
    at ChildProcess.<anonymous> (c:\Users\Ma Jiahao\.vscode\extensions\ms-toolsai.jupyter-2022.8.1002431955\out\extension.node.js:2:2334688)
    at ChildProcess.emit (node:events:538:35)
    at Process.ChildProcess._handle.onexit (node:internal/child_process:291:12) {
  category: 'kerneldied',
  kernelConnectionMetadata: {
    kind: 'startUsingLocalKernelSpec',
    kernelSpec: {
      specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json',
      interpreterPath: undefined,
      isRegisteredByVSC: undefined,
      name: 'ir',
      argv: [Array],
      language: 'R',
      executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R',
      display_name: 'R',
      metadata: [Object],
      env: undefined,
      interrupt_mode: undefined
    },
    interpreter: undefined,
    id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}'
  },
  exitCode: 1,
  stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' +
    'Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' +
    'In addition: Warning message:\r\n' +
    'In open.connection(con, "rb") :\r\n' +
    `  cannot open file '"c:\\Users\\Ma Jiahao\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument\r\n` +
    'Execution halted\r\n'
}
info 19:17:55.732: Dispose Kernel 'd:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb' associated with 'd:\JupyterNotebookWorkp\Genome Data Analyse\Untitled.ipynb'
error 19:17:55.733: Error in execution o [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details.
    at ChildProcess.<anonymous> (c:\Users\Ma Jiahao\.vscode\extensions\ms-toolsai.jupyter-2022.8.1002431955\out\extension.node.js:2:2334688)
    at ChildProcess.emit (node:events:538:35)
    at Process.ChildProcess._handle.onexit (node:internal/child_process:291:12) {
  category: 'kerneldied',
  kernelConnectionMetadata: {
    kind: 'startUsingLocalKernelSpec',
    kernelSpec: {
      specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json',
      interpreterPath: undefined,
      isRegisteredByVSC: undefined,
      name: 'ir',
      argv: [Array],
      language: 'R',
      executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R',
      display_name: 'R',
      metadata: [Object],
      env: undefined,
      interrupt_mode: undefined
    },
    interpreter: undefined,
    id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}'
  },
  exitCode: 1,
  stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' +
    'Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' +
    'In addition: Warning message:\r\n' +
    'In open.connection(con, "rb") :\r\n' +
    `  cannot open file '"c:\\Users\\Ma Jiahao\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument\r\n` +
    'Execution halted\r\n'
}
error 19:17:55.733: Error in execution (get message for cell) o [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection
Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection
In addition: Warning message:
In open.connection(con, "rb") :
  cannot open file '"c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument
Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details.
    at ChildProcess.<anonymous> (c:\Users\Ma Jiahao\.vscode\extensions\ms-toolsai.jupyter-2022.8.1002431955\out\extension.node.js:2:2334688)
    at ChildProcess.emit (node:events:538:35)
    at Process.ChildProcess._handle.onexit (node:internal/child_process:291:12) {
  category: 'kerneldied',
  kernelConnectionMetadata: {
    kind: 'startUsingLocalKernelSpec',
    kernelSpec: {
      specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json',
      interpreterPath: undefined,
      isRegisteredByVSC: undefined,
      name: 'ir',
      argv: [Array],
      language: 'R',
      executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R',
      display_name: 'R',
      metadata: [Object],
      env: undefined,
      interrupt_mode: undefined
    },
    interpreter: undefined,
    id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}'
  },
  exitCode: 1,
  stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' +
    'Calls: <Anonymous> ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' +
    'In addition: Warning message:\r\n' +
    'In open.connection(con, "rb") :\r\n' +
    `  cannot open file '"c:\\Users\\Ma Jiahao\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-10184MfuMSpxDR9z1.json"': Invalid argument\r\n` +
    'Execution halted\r\n'
}

and Here's a section of log from Jupyter lab:

Jupyter Lab Logs

[D 2022-09-15 19:27:59.169 ServerApp] Accepting token-authenticated connection from ::1
[D 2022-09-15 19:27:59.176 ServerApp] Instantiating kernel 'R' with kernel provisioner: local-provisioner
[D 2022-09-15 19:27:59.202 ServerApp] Starting kernel: ['C:/PROGRA~1/R/R-42~1.1/bin/x64/R', '--slave', '-e', 'IRkernel::main()', '--args', 'C:\\Users\\Ma Jiahao\\AppData\\Roaming\\jupyter\\runtime\\kernel-3b3cd1c4-b421-489a-a566-8d0b4e534b25.json']
[D 2022-09-15 19:27:59.212 ServerApp] Connecting to: tcp://127.0.0.1:59462
[D 2022-09-15 19:27:59.220 ServerApp] Path components\MathJax\extensions\Safe.js served from D:\Miniconda3\lib\site-packages\notebook\static\components\MathJax\extensions\Safe.js
[D 2022-09-15 19:27:59.220 ServerApp] 304 GET /static/notebook/components/MathJax/extensions/Safe.js?V=2.7.9 (127.0.0.1) 2.89ms
[D 2022-09-15 19:27:59.220 ServerApp] Connecting to: tcp://127.0.0.1:59459
[I 2022-09-15 19:27:59.223 ServerApp] Kernel started: 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:27:59.224 ServerApp] Kernel args: {'kernel_name': 'ir', 'cwd': 'D:\\JupyterNotebookWorkp\\Genome Data Analyse'}
[D 2022-09-15 19:27:59.224 ServerApp] 201 POST /api/sessions?1663241279164 (::1) 56.70ms
[D 2022-09-15 19:27:59.281 ServerApp] Path components\MathJax\jax\output\HTML-CSS\fonts\STIX-Web\fontdata.js served from D:\Miniconda3\lib\site-packages\notebook\static\components\MathJax\jax\output\HTML-CSS\fonts\STIX-Web\fontdata.js
[D 2022-09-15 19:27:59.282 ServerApp] 304 GET /static/notebook/components/MathJax/jax/output/HTML-CSS/fonts/STIX-Web/fontdata.js?V=2.7.9 (::1) 1.00ms
[D 2022-09-15 19:27:59.296 ServerApp] Accepting token-authenticated connection from ::1
[D 2022-09-15 19:27:59.298 ServerApp] 200 GET /api/sessions?1663241279273 (::1) 1.57ms
[D 2022-09-15 19:27:59.332 ServerApp] Initializing websocket connection /api/kernels/67fe58c0-a62f-4bdf-9ca9-9b78c71f6818/channels
[W 2022-09-15 19:27:59.334 ServerApp] 404 GET /api/kernels/67fe58c0-a62f-4bdf-9ca9-9b78c71f6818/channels?session_id=a73e1f98-0031-4e28-aae5-b8b05177c812 (::1): Kernel does not exist: 67fe58c0-a62f-4bdf-9ca9-9b78c71f6818
[D 2022-09-15 19:27:59.334 ServerApp] Using contents: services/contents
[W 2022-09-15 19:27:59.335 ServerApp] 404 GET /api/kernels/67fe58c0-a62f-4bdf-9ca9-9b78c71f6818/channels?session_id=a73e1f98-0031-4e28-aae5-b8b05177c812 (::1) 2.92ms referer=None
[D 2022-09-15 19:27:59.337 ServerApp] Accepting token-authenticated connection from ::1
[D 2022-09-15 19:27:59.339 LabApp] 204 PUT /lab/api/workspaces/auto-V?1663241279295 (::1) 1.86ms
[W 2022-09-15 19:27:59.357 ServerApp] 404 GET /api/kernels/67fe58c0-a62f-4bdf-9ca9-9b78c71f6818?1663241279337 (::1): Kernel does not exist: 67fe58c0-a62f-4bdf-9ca9-9b78c71f6818
[W 2022-09-15 19:27:59.357 ServerApp] Kernel does not exist: 67fe58c0-a62f-4bdf-9ca9-9b78c71f6818
[W 2022-09-15 19:27:59.358 ServerApp] 404 GET /api/kernels/67fe58c0-a62f-4bdf-9ca9-9b78c71f6818?1663241279337 (::1) 2.10ms referer=http://localhost:8888/lab
[D 2022-09-15 19:27:59.413 ServerApp] Initializing websocket connection /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels
[D 2022-09-15 19:27:59.415 ServerApp] Requesting kernel info from 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:27:59.416 ServerApp] Connecting to: tcp://127.0.0.1:59458
[D 2022-09-15 19:27:59.440 ServerApp] Accepting token-authenticated connection from ::1
[D 2022-09-15 19:27:59.441 ServerApp] 200 PATCH /api/sessions/a4971480-44d6-4dd3-b86e-399a007290b2?1663241279384 (::1) 1.11ms
[D 2022-09-15 19:27:59.471 ServerApp] Accepting token-authenticated connection from 127.0.0.1
[D 2022-09-15 19:27:59.474 ServerApp] 200 GET /api/kernels?1663241279388 (127.0.0.1) 1.41ms
[D 2022-09-15 19:27:59.517 ServerApp] Accepting token-authenticated connection from 127.0.0.1
[D 2022-09-15 19:27:59.518 ServerApp] 200 PATCH /api/sessions/a4971480-44d6-4dd3-b86e-399a007290b2?1663241279496 (127.0.0.1) 1.52ms
[D 2022-09-15 19:27:59.519 ServerApp] Accepting token-authenticated connection from ::1
[D 2022-09-15 19:27:59.520 ServerApp] 200 GET /api/sessions?1663241279500 (::1) 1.12ms
[D 2022-09-15 19:27:59.528 ServerApp] Accepting token-authenticated connection from ::1
[D 2022-09-15 19:27:59.529 ServerApp] Found kernel ir in C:\Users\Ma Jiahao\AppData\Roaming\jupyter\kernels
[D 2022-09-15 19:27:59.529 ServerApp] Found kernel python3 in D:\Miniconda3\share\jupyter\kernels
[D 2022-09-15 19:27:59.530 ServerApp] Found kernel ir32 in C:\ProgramData\jupyter\kernels
[D 2022-09-15 19:27:59.534 ServerApp] 200 GET /api/kernelspecs?1663241279524 (::1) 5.79ms
[D 2022-09-15 19:27:59.734 ServerApp] Initializing websocket connection /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels
[D 2022-09-15 19:27:59.735 ServerApp] Waiting for pending kernel_info request
[D 2022-09-15 19:28:00.057 ServerApp] Accepting token-authenticated connection from ::1
[D 2022-09-15 19:28:00.059 LabApp] 204 PUT /lab/api/workspaces/auto-V?1663241280052 (::1) 2.35ms
[D 2022-09-15 19:28:00.449 ServerApp] activity on 3b3cd1c4-b421-489a-a566-8d0b4e534b25: status (busy)
[D 2022-09-15 19:28:00.450 ServerApp] Received kernel info: {'protocol_version': '5.3', 'implementation': 'IRkernel', 'implementation_version': '1.3.0.9000', 'language_info': {'name': 'R', 'codemirror_mode': 'r', 'pygments_lexer': 'r', 'mimetype': 'text/x-r-source', 'file_extension': '.r', 'version': '4.2.1'}, 'banner': 'R version 4.2.1 (2022-06-23 ucrt)', 'status': 'ok'}
[D 2022-09-15 19:28:00.451 ServerApp] 101 GET /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels?session_id=6907d9c5-93b1-4cf8-8b38-63d962ad692f (::1) 1038.30ms
[D 2022-09-15 19:28:00.452 ServerApp] Opening websocket /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels
[D 2022-09-15 19:28:00.452 ServerApp] Getting buffer for 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.452 ServerApp] Connecting to: tcp://127.0.0.1:59459
[D 2022-09-15 19:28:00.454 ServerApp] Connecting to: tcp://127.0.0.1:59458
[D 2022-09-15 19:28:00.455 ServerApp] Connecting to: tcp://127.0.0.1:59462
[D 2022-09-15 19:28:00.455 ServerApp] Connecting to: tcp://127.0.0.1:59460
[D 2022-09-15 19:28:00.457 ServerApp] Nudge: not nudging busy kernel 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.458 ServerApp] activity on 3b3cd1c4-b421-489a-a566-8d0b4e534b25: status (idle)
[D 2022-09-15 19:28:00.459 ServerApp] 101 GET /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels?session_id=5d5288d0-f630-40f1-8bbc-f9f5992704c5 (127.0.0.1) 725.70ms
[D 2022-09-15 19:28:00.459 ServerApp] Opening websocket /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels
[D 2022-09-15 19:28:00.459 ServerApp] Getting buffer for 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.459 ServerApp] Connecting to: tcp://127.0.0.1:59459
[D 2022-09-15 19:28:00.460 ServerApp] Connecting to: tcp://127.0.0.1:59458
[D 2022-09-15 19:28:00.462 ServerApp] Connecting to: tcp://127.0.0.1:59462
[D 2022-09-15 19:28:00.463 ServerApp] Connecting to: tcp://127.0.0.1:59460
[D 2022-09-15 19:28:00.464 ServerApp] Connecting to: tcp://127.0.0.1:59458
[D 2022-09-15 19:28:00.465 ServerApp] Connecting to: tcp://127.0.0.1:59462
[D 2022-09-15 19:28:00.467 ServerApp] Nudge: attempt 1 on kernel 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.468 ServerApp] Initializing websocket connection /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels
[D 2022-09-15 19:28:00.469 ServerApp] 101 GET /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels?session_id=053da561-96fe-416e-ad75-f4099ce5c09e (::1) 1.99ms
[D 2022-09-15 19:28:00.469 ServerApp] Opening websocket /api/kernels/3b3cd1c4-b421-489a-a566-8d0b4e534b25/channels
[D 2022-09-15 19:28:00.469 ServerApp] Getting buffer for 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.469 ServerApp] Connecting to: tcp://127.0.0.1:59459
[D 2022-09-15 19:28:00.471 ServerApp] Connecting to: tcp://127.0.0.1:59458
[D 2022-09-15 19:28:00.474 ServerApp] Connecting to: tcp://127.0.0.1:59462
[D 2022-09-15 19:28:00.475 ServerApp] Connecting to: tcp://127.0.0.1:59460
[D 2022-09-15 19:28:00.476 ServerApp] Connecting to: tcp://127.0.0.1:59458
[D 2022-09-15 19:28:00.477 ServerApp] Connecting to: tcp://127.0.0.1:59462
[D 2022-09-15 19:28:00.478 ServerApp] Nudge: attempt 1 on kernel 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.483 ServerApp] activity on 3b3cd1c4-b421-489a-a566-8d0b4e534b25: status (busy)
[D 2022-09-15 19:28:00.484 ServerApp] Nudge: IOPub received: 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.484 ServerApp] Nudge: resolving iopub future: 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.485 ServerApp] Nudge: IOPub received: 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.485 ServerApp] Nudge: resolving iopub future: 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.486 ServerApp] activity on 3b3cd1c4-b421-489a-a566-8d0b4e534b25: status (idle)
[D 2022-09-15 19:28:00.488 ServerApp] Websocket closed 3b3cd1c4-b421-489a-a566-8d0b4e534b25:6907d9c5-93b1-4cf8-8b38-63d962ad692f
[D 2022-09-15 19:28:00.495 ServerApp] activity on 3b3cd1c4-b421-489a-a566-8d0b4e534b25: status (busy)
[D 2022-09-15 19:28:00.496 ServerApp] Nudge: shell info reply received: 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.496 ServerApp] Nudge: resolving shell future: 3b3cd1c4-b421-489a-a566-8d0b4e534b25
[D 2022-09-15 19:28:00.499 ServerApp] activity on 3b3cd1c4-b421-489a-a566-8d0b4e534b25: status (idle)

Seeing that everything works well on Jupyter Lab even LSP.

DonJayamanne commented 2 years ago

Please could you open these files and upload the contents of them

MiliJhM commented 2 years ago

Below is what in 'C:\ProgramData\jupyter\kernels\ir\kernel.json'.

{
  "argv": ["C:/PROGRA~1/R/R-42~1.1/bin/x64/R", "--slave", "-e", "IRkernel::main()", "--args", "{connection_file}"],
  "display_name": "R",
  "language": "R"
}

But this file does not exist in this directory 'c:\Users\Ma Jiahao\AppData\Roaming\jupyter\runtime\kernel-v2-10184MfuMSpxDR9z1.json'. I try to repeat the error some times, and this file will appear at a specific time at kernel startup, but will be deleted soon.

michael-pearce commented 1 year ago

I've been experiencing an identical error, including the missing json file. Have there been any developments on this front?

jlgraves-ubc commented 1 year ago

I've been experiencing an identical error, including the missing json file. Have there been any developments on this front?

Ditto here!

DonJayamanne commented 1 year ago

Please could you install the latest pre-relaese version of the extension, and let me know if this persists

Please could you enable logging as follows:

jlgraves-ubc commented 1 year ago

Yes, still an issue:

Show Logs ``` Visual Studio Code (1.73.1, undefined, desktop) Jupyter Extension Version: 2022.11.1003281132. Python Extension Version: 2022.18.2. No workspace folder opened. info 17:10:45.886: ZMQ install verified. User belongs to experiment group 'jupyterTest' User belongs to experiment group 'jupyterEnhancedDataViewer' debug 17:10:46.152: Get Custom Env Variables, Class name = S (started execution), Arg 1: undefined, Arg 2: "RunPythonCode" info 17:10:46.153: LSP Notebooks experiment is enabled debug 17:10:46.153: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 17:10:46.157: getCondaFile, Class name = k (started execution) debug 17:10:46.157: getCondaVersion, Class name = k (started execution) debug 17:10:46.157: getCondaVersionFromPython, Class name = k (started execution) debug 17:10:46.157: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 17:10:46.169: Get Custom Env Variables, Class name = S, completed in 17ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode" debug 17:10:46.170: Get Jupyter Sub Paths, Class name = j, completed in 18ms, has a truthy return value, Arg 1: "", Arg 2: "kernels", Return Value: debug 17:10:46.170: Get Jupyter Kernel Paths, Class name = j, completed in 18ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:46.171: Getting Jupyter KernelSpec Root Path, Class name = j, completed in 1ms, has a truthy return value, , Return Value: debug 17:10:46.173: Get KernelSpec root path, Class name = j, completed in 21ms, has a truthy return value, Arg 1: {"_isCancelled":false,"_emitter":null}, Return Value: , debug 17:10:46.179: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 17:10:46.180: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 17:10:46.184: No controller, hence notebook communications cannot be initialized for editor c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb debug 17:10:46.197: Loading kernelspec from c:\Users\Jonathan Graves\AppData\Roaming\jupyter\kernels\ir\kernel.json for debug 17:10:46.197: Loading kernelspec from c:\ProgramData\jupyter\kernels\ir\kernel.json for debug 17:10:46.197: Getting Jupyter KernelSpec Root Path, Class name = j, completed in 0ms, has a truthy return value, , Return Value: debug 17:10:46.198: Getting Jupyter KernelSpec Root Path, Class name = j, completed in 0ms, has a truthy return value, , Return Value: debug 17:10:46.564: Found 1 saved URIs, [{"time":1669165596937,"serverId":"8ca98d2f0920e00451452396ecdd6870417ff7be1c54cec203783d0ec908a258","displayName":"http://127.0.0.1:8888?token=8d1f29b452aac5523b2ffed1191f410b7474867b658a3fc1","uri":" http://127.0.0.1:8888/lab?token=8d1f29b452aac5523b2ffed1191f410b7474867b658a3fc1","isValidated":true}] debug 17:10:46.565: getCondaFile, Class name = k, completed in 408ms, has a truthy return value debug 17:10:46.565: getCondaVersion, Class name = k, completed in 408ms, has a truthy return value debug 17:10:46.889: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 17:10:46.952: Get Active Interpreter, Class name = x, completed in 799ms, has a truthy return value, Arg 1: undefined, Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 17:10:46.953: Get Active Interpreter, Class name = x, completed in 796ms, has a truthy return value, Arg 1: undefined, Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 17:10:46.955: Get Active Interpreter, Class name = x, completed in 775ms, has a truthy return value, Arg 1: undefined, Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 17:10:46.955: Get Active Interpreter, Class name = x, completed in 775ms, has a truthy return value, Arg 1: undefined, Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 17:10:46.995: Get Active Interpreter, Class name = x, completed in 106ms, has a truthy return value, Arg 1: undefined, Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 17:10:46.995: interpreterPackages getPackageInformation, Class name = r (started execution), Arg 1: {"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} debug 17:10:46.995: Create activated Env, Class name = w (started execution), Arg 1: {"allowEnvironmentFetchExceptions":true,"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} debug 17:10:46.995: Getting activated env variables, Class name = K (started execution), Arg 1: undefined, Arg 2: , Arg 3: true debug 17:10:46.995: Getting activated env variables impl, Class name = K (started execution), Arg 1: undefined, Arg 2: debug 17:10:46.995: Getting activated env variables ourselves, Class name = K (started execution), Arg 1: undefined, Arg 2: debug 17:10:46.995: Get Interpreter details, Class name = x (started execution), Arg 1: "/C:/Python/python.exe" debug 17:10:46.995: Got activation Env Vars without any caching. Key is _C:\PYTHON\PYTHON.EXE debug 17:10:46.995: Getting activated env variables from Python, Class name = K (started execution), Arg 1: undefined, Arg 2: debug 17:10:46.995: Get Custom Env Variables, Class name = S (started execution), Arg 1: undefined, Arg 2: "RunPythonCode" debug 17:10:47.000: Get Custom Env Variables, Class name = S, completed in 5ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode" debug 17:10:47.000: Interpreter details for c:\Python\python.exe from Python is {"internal":{"path":"C:\\Python\\python.exe","id":"C:\\PYTHON\\PYTHON.EXE","executable":{"uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\Python"},"version":{"major":3,"minor":11,"micro":0,"release":{"level":"final","serial":0},"sysVersion":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"},"tools":[]},"id":"C:\\PYTHON\\PYTHON.EXE"} and our mapping is {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 17:10:47.000: Get Interpreter details, Class name = x, completed in 5ms, has a truthy return value, Arg 1: "/C:/Python/python.exe" debug 17:10:47.000: Create ProcessService, Class name = h (started execution), Arg 1: undefined debug 17:10:47.000: Get Custom Env Variables, Class name = S (started execution), Arg 1: undefined, Arg 2: "RunNonPythonCode" debug 17:10:47.000: Getting env activation commands, Class name = K (started execution), Arg 1: undefined, Arg 2: debug 17:10:47.000: Getting activation commands for file:///c%3A/Python/python.exe debug 17:10:47.000: Getting activation commands for file:///c%3A/Python/python.exe are not cached. May take a while. debug 17:10:47.000: Get Custom Env Variables, Class name = S (started execution), Arg 1: undefined, Arg 2: "RunPythonCode" debug 17:10:47.002: Get Custom Env Variables, Class name = S, completed in 2ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunNonPythonCode" debug 17:10:47.002: Get Custom Env Variables, Class name = S, completed in 2ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode" debug 17:10:47.002: Create ProcessService, Class name = h, completed in 2ms, has a truthy return value, Arg 1: undefined debug 17:10:47.501: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher') with name 'Python 3.11.0' debug 17:10:48.155: Getting env activation commands, Class name = K, completed in 1155ms, has a falsy return value, Arg 1: undefined, Arg 2: info 17:10:48.157: Got empty env vars with python c:\Python\python.exe in 1162ms debug 17:10:48.157: Getting activated env variables ourselves, Class name = K, completed in 1162ms, has a truthy return value, Arg 1: undefined, Arg 2: debug 17:10:48.157: Getting activated env variables from Python, Class name = K, completed in 1162ms, has a falsy return value, Arg 1: undefined, Arg 2: debug 17:10:48.157: Got env vars ourselves c:\Python\python.exe in 1162ms with 60 variables debug 17:10:48.157: Got env vars with python c:\Python\python.exe in 1162ms with 0 variables debug 17:10:48.157: Got env vars from Python faster, but empty c:\Python\python.exe debug 17:10:48.157: Getting activated env variables impl, Class name = K, completed in 1162ms, has a truthy return value, Arg 1: undefined, Arg 2: debug 17:10:48.157: Getting activated env variables, Class name = K, completed in 1162ms, has a truthy return value, Arg 1: undefined, Arg 2: , Arg 3: true debug 17:10:48.157: Create activated Env, Class name = w, completed in 1162ms, has a truthy return value, Arg 1: {"allowEnvironmentFetchExceptions":true,"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} info 17:10:48.161: Process Execution: > c:\Python\python.exe -m pip list > c:\Python\python.exe -m pip list debug 17:10:49.582: interpreterPackages getPackageInformation, Class name = r, completed in 2587ms, has a falsy return value, Arg 1: {"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} debug 17:10:50.538: getCondaVersionFromPython, Class name = k, completed in 4381ms, has a truthy return value debug 17:10:50.806: Full interpreter list after refreshing (total 4623ms, resolve 737ms, refresh 3886ms) is length: 4, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE:base:Conda:c:\ProgramData\Miniconda3\python.exe:C:\ProgramData\Miniconda3\python.exe, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE:r:Conda:c:\ProgramData\Miniconda3\envs\r\python.exe:C:\ProgramData\Miniconda3\envs\r\python.exe, C:\CONDA_ENVS\R2\PYTHON.EXE:r2:Conda:c:\conda_envs\r2\python.exe:C:\conda_envs\r2\python.exe, C:\PYTHON\PYTHON.EXE:undefined::c:\Python\python.exe:C:\Python\python.exe debug 17:10:50.818: Python environment for C:\PYTHON\PYTHON.EXE is C:\PYTHON\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\Python\\python.exe","id":"C:\\PYTHON\\PYTHON.EXE","executable":{"uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\Python"},"version":{"major":3,"minor":11,"micro":0,"release":{"level":"final","serial":0},"sysVersion":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"},"tools":[]},"id":"C:\\PYTHON\\PYTHON.EXE"} and translated is {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 17:10:50.819: refreshData after detecting changes to interpreters debug 17:10:50.819: loadData after detecting changes to interpreters debug 17:10:50.820: Python environment for C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE is C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\ProgramData\\Miniconda3\\python.exe","id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE","executable":{"uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\python.exe","_sep":1,"path":"/C:/ProgramData/Miniconda3/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\ProgramData\\Miniconda3"},"environment":{"type":"Conda","name":"base","folderUri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3","scheme":"file"}},"version":{"major":3,"minor":9,"micro":12,"release":{"level":"final","serial":0},"sysVersion":"3.9.12 (main, Apr 4 2022, 05:22:27) [MSC v.1916 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE"} and translated is {"id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3","envPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3","scheme":"file"},"displayPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3","scheme":"file"},"envName":"base","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\python.exe","_sep":1,"path":"/C:/ProgramData/Miniconda3/python.exe","scheme":"file"},"displayName":"base","envType":"Conda","version":{"major":3,"minor":9,"patch":12,"raw":"3.9.12 (main, Apr 4 2022, 05:22:27) [MSC v.1916 64 bit (AMD64)]"}} debug 17:10:50.821: refreshData after detecting changes to interpreters debug 17:10:50.822: loadData after detecting changes to interpreters debug 17:10:50.822: Python environment for C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE is C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","executable":{"uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r"},"environment":{"type":"Conda","name":"r","folderUri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"}},"version":{"major":3,"minor":10,"micro":6,"release":{"level":"final","serial":0},"sysVersion":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE"} and translated is {"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r","envPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"displayPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"envName":"r","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"displayName":"r","envType":"Conda","version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}} debug 17:10:50.823: refreshData after detecting changes to interpreters debug 17:10:50.823: loadData after detecting changes to interpreters debug 17:10:50.824: Python environment for C:\CONDA_ENVS\R2\PYTHON.EXE is C:\CONDA_ENVS\R2\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\conda_envs\\r2\\python.exe","id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE","executable":{"uri":{"$mid":1,"fsPath":"c:\\conda_envs\\r2\\python.exe","_sep":1,"path":"/C:/conda_envs/r2/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\conda_envs\\r2"},"environment":{"type":"Conda","name":"r2","folderUri":{"$mid":1,"path":"/C:/conda_envs/r2","scheme":"file"}},"version":{"major":3,"minor":10,"micro":6,"release":{"level":"final","serial":0},"sysVersion":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE"} and translated is {"id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE","sysPrefix":"C:\\conda_envs\\r2","envPath":{"$mid":1,"path":"/C:/conda_envs/r2","scheme":"file"},"displayPath":{"$mid":1,"path":"/C:/conda_envs/r2","scheme":"file"},"envName":"r2","uri":{"$mid":1,"fsPath":"c:\\conda_envs\\r2\\python.exe","_sep":1,"path":"/C:/conda_envs/r2/python.exe","scheme":"file"},"displayName":"r2","envType":"Conda","version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}} debug 17:10:50.826: Full interpreter list is length: 4, C:\PYTHON\PYTHON.EXE::Unknown:c:\Python\python.exe, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE:base:Conda:c:\ProgramData\Miniconda3\python.exe, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE:r:Conda:c:\ProgramData\Miniconda3\envs\r\python.exe, C:\CONDA_ENVS\R2\PYTHON.EXE:r2:Conda:c:\conda_envs\r2\python.exe debug 17:10:50.826: Listing Python kernels for Interpreter c:\Python\python.exe debug 17:10:50.826: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 17:10:50.827: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 17:10:50.827: Listing Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 17:10:50.827: Found 6 cached controllers debug 17:10:50.827: Creating 6 controllers debug 17:10:50.827: Creating notebook controller for startUsingLocalKernelSpec & view jupyter-notebook (id='.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 17:10:50.828: Creating notebook controller for startUsingLocalKernelSpec & view interactive (id='.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 17:10:50.828: Creating notebook controller for startUsingLocalKernelSpec & view jupyter-notebook (id='.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 17:10:50.829: Creating notebook controller for startUsingLocalKernelSpec & view interactive (id='.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 17:10:50.830: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher') with name 'base (Python 3.9.12)' debug 17:10:50.830: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher') with name 'base (Python 3.9.12)' debug 17:10:50.830: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher') with name 'Python 3.11.0' debug 17:10:50.831: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher') with name 'r2 (Python 3.10.6)' debug 17:10:50.832: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher') with name 'r2 (Python 3.10.6)' debug 17:10:50.832: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher') with name 'r (Python 3.10.6)' debug 17:10:50.832: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher') with name 'r (Python 3.10.6)' debug 17:10:50.833: Found 6 cached controllers debug 17:10:50.833: Creating 6 controllers debug 17:10:50.833: Found 6 cached controllers debug 17:10:50.833: Creating 6 controllers debug 17:10:50.834: Listing Python kernels for Interpreter c:\Python\python.exe debug 17:10:50.834: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 17:10:50.834: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 17:10:50.834: Listing Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 17:10:50.834: Listing Python kernels for Interpreter c:\Python\python.exe debug 17:10:50.834: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 17:10:50.834: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 17:10:50.834: Listing Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 17:10:50.835: Listing Python kernels for Interpreter c:\Python\python.exe debug 17:10:50.835: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 17:10:50.835: Listing Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 17:10:50.835: Listing Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 10ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 10ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 9ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 9ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 2ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 2ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 2ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get Jupyter Kernel Paths, Class name = j, completed in 2ms, has a truthy return value, Arg 1: "", Return Value: debug 17:10:50.836: Get KernelSpec root path, Class name = j, completed in 10ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.836: Get KernelSpec root path, Class name = j, completed in 10ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.836: Get KernelSpec root path, Class name = j, completed in 9ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.837: Get KernelSpec root path, Class name = j, completed in 10ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.837: Get KernelSpec root path, Class name = j, completed in 3ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.837: Get KernelSpec root path, Class name = j, completed in 3ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.837: Get KernelSpec root path, Class name = j, completed in 3ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.837: Get KernelSpec root path, Class name = j, completed in 3ms, has a truthy return value, Arg 1: {"isCancellationRequested":true}, Return Value: debug 17:10:50.849: KernelProvider switched kernel to id = .ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} debug 17:10:50.849: start the kernel, options.disableUI=true for c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb debug 17:10:50.850: Start Jupyter Session in kernel.ts with disableUI = true debug 17:10:50.850: Initialize notebook communications for editor c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb debug 17:10:50.850: Resolving notebook UI Comms (resolve) for c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb debug 17:10:50.850: initialize CommonMessageCoordinator debug 17:10:50.854: Registering commtarget jupyter.widget debug 17:10:50.854: IPyWidgetMessageDispatcher.initialize debug 17:10:50.854: Controller selection change completed debug 17:10:50.856: Storing Preferred remote kernel for c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb is undefined info 17:10:50.856: Starting Jupyter Session startUsingLocalKernelSpec, .ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for 'c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb' (disableUI=true) debug 17:10:50.857: Creating raw notebook for resource 'c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb' info 17:10:50.857: Computing working directory for resource 'c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb' debug 17:10:50.857: Kernel Launcher. launch, Class name = r (started execution), Arg 1: {"id":".ir.c:\\conda_envs\\r2\\lib\\R\\bin\\x64\\R.\\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/conda_envs/r2/lib/R/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/conda_envs/r2/lib/R/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb", Arg 4: "~\\Documents\\TLEF\\Notebooks\\econometrics\\econ_adv\\01_classification_clustering", Arg 5: {"_isCancelled":false,"_emitter":null} debug 17:10:50.910: Launching kernel in kernelProcess.ts, Class name = x (started execution), Arg 1: "~\\Documents\\TLEF\\Notebooks\\econometrics\\econ_adv\\01_classification_clustering", Arg 2: "" info 17:10:50.910: Launching Raw Kernel & not daemon R # C:/conda_envs/r2/lib/R/bin/x64/R debug 17:10:50.911: Create ProcessService, Class name = h (started execution), Arg 1: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb" debug 17:10:50.911: Get Custom Env Variables, Class name = S (started execution), Arg 1: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb", Arg 2: "RunNonPythonCode" debug 17:10:50.911: Cached data exists getEnvironmentVariables, c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb debug 17:10:50.911: Get Custom Env Variables, Class name = S, completed in 0ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb", Arg 2: "RunNonPythonCode" debug 17:10:50.911: Create ProcessService, Class name = h, completed in 0ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb" info 17:10:50.911: No custom variables nor do we have a conda environment info 17:10:50.913: Process Execution: > C:/conda_envs/r2/lib/R/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-14296NlDnCz7xjdNx.json" > C:/conda_envs/r2/lib/R/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-14296NlDnCz7xjdNx.json" info 17:10:50.913: Process Execution: cwd: ~\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering cwd: ~\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering debug 17:10:50.913: Launching kernel in kernelProcess.ts, Class name = x, completed in 3ms, has a truthy return value, Arg 1: "~\\Documents\\TLEF\\Notebooks\\econometrics\\econ_adv\\01_classification_clustering", Arg 2: "" error 17:10:50.915: Kernel died [Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/conda_envs/r2/lib/R/bin/x64/R', path: 'C:/conda_envs/r2/lib/R/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-14296NlDnCz7xjdNx.json"' ] } error 17:10:50.917: Disposing kernel process due to an error [Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/conda_envs/r2/lib/R/bin/x64/R', path: 'C:/conda_envs/r2/lib/R/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-14296NlDnCz7xjdNx.json"' ] } error 17:10:50.918: info 17:10:50.918: Dispose Kernel process undefined. debug 17:10:50.918: Disposed Kernel process undefined. error 17:10:50.920: Kernel Launcher. launch, Class name = r, completed in 63ms, has a falsy return value, Arg 1: {"id":".ir.c:\\conda_envs\\r2\\lib\\R\\bin\\x64\\R.\\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/conda_envs/r2/lib/R/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/conda_envs/r2/lib/R/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb", Arg 4: "~\\Documents\\TLEF\\Notebooks\\econometrics\\econ_adv\\01_classification_clustering", Arg 5: [i [Error]: at new r (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/conda_envs/r2/lib/R/bin/x64/R', path: 'C:/conda_envs/r2/lib/R/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-14296NlDnCz7xjdNx.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/conda_envs/r2/lib/R/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\conda_envs\\r2\\lib\\R\\bin\\x64\\R.\\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } error 17:10:50.926: Failed to connect raw kernel session: Error: The kernel died. Error: ... View Jupyter [log](command:jupyter.viewOutput) for further details. debug 17:10:50.926: Shutdown session -- complete debug 17:10:50.926: failed to create IJupyterKernelConnectionSession in kernel, UI Disabled = true [i [Error]: at new r (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/conda_envs/r2/lib/R/bin/x64/R', path: 'C:/conda_envs/r2/lib/R/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-14296NlDnCz7xjdNx.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/conda_envs/r2/lib/R/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\conda_envs\\r2\\lib\\R\\bin\\x64\\R.\\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } warn 17:10:50.927: Error occurred while trying to start the kernel, options.disableUI=true [i [Error]: at new r (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Jonathan Graves\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/conda_envs/r2/lib/R/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/conda_envs/r2/lib/R/bin/x64/R', path: 'C:/conda_envs/r2/lib/R/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-14296NlDnCz7xjdNx.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\ProgramData\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/conda_envs/r2/lib/R/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\conda_envs\\r2\\lib\\R\\bin\\x64\\R.\\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } debug 17:10:50.933: Rank Kernels, Class name = p (started execution), Arg 1: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb", Arg 2: "", Arg 3: {"kernelspec":{"display_name":"R","language":"R","name":"ir"},"language_info":{"codemirror_mode":"r","file_extension":".r","mimetype":"text/x-r-source","name":"R","pygments_lexer":"r","version":"4.2.1"},"vscode":{"interpreter":{"hash":"19d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4"}}}, Arg 4: undefined, Arg 5: "", Arg 6: undefined info 17:10:50.933: Find preferred kernel for c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb with metadata {"kernelspec":{"display_name":"R","language":"R","name":"ir"},"language_info":{"codemirror_mode":"r","file_extension":".r","mimetype":"text/x-r-source","name":"R","pygments_lexer":"r","version":"4.2.1"},"vscode":{"interpreter":{"hash":"19d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4"}}} & preferred interpreter debug 17:10:50.934: Rank Kernels, Class name = p, completed in 1ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Documents/TLEF/Notebooks/econometrics/econ_adv/01_classification_clustering/01_classification_and_clustering.ipynb", Arg 2: "", Arg 3: {"kernelspec":{"display_name":"R","language":"R","name":"ir"},"language_info":{"codemirror_mode":"r","file_extension":".r","mimetype":"text/x-r-source","name":"R","pygments_lexer":"r","version":"4.2.1"},"vscode":{"interpreter":{"hash":"19d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4"}}}, Arg 4: undefined, Arg 5: "", Arg 6: undefined info 17:10:50.934: Preferred kernel .ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} is exact match or top match for non python kernels, (false, undefined, true, true) info 17:10:50.935: PreferredConnection: .ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} found for NotebookDocument: c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb debug 17:10:50.935: TargetController found ID: startUsingLocalKernelSpec:.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for document c:\Users\Jonathan Graves\Documents\TLEF\Notebooks\econometrics\econ_adv\01_classification_clustering\01_classification_and_clustering.ipynb debug 17:10:50.936: Compute Preferred Controller, Class name = k, completed in 2ms, has a truthy return value, Arg 1: , Arg 2: undefined, Arg 3: {"_isCancelled":false,"_emitter":{"_disposed":false,"_listeners":{"_first":{},"_last":{},"_size":0}}}, Return Value: debug 17:10:51.257: IPyWidgetMessageDispatcher.initialize ```
jlgraves-ubc commented 1 year ago

Interestingly, I can get this to work if I start a server locally then connect to it using a URI.

This implies to me, at least, that it's looking for the runtime file that's for some reason not quite right.

michael-pearce commented 1 year ago

Unfortunately still having the same issue. Log output below:

Show Logs ``` Visual Studio Code (1.73.1, undefined, desktop) Jupyter Extension Version: 2022.11.1003281132. Python Extension Version: 2022.18.2. Workspace folder c:\Users\Michael Pearce\Documents\Code\colleen-rstudio info 20:47:53.179: ZMQ install verified. User belongs to experiment group 'jupyterTestcf' User belongs to experiment group 'jupyterEnhancedDataViewer' debug 20:47:53.611: Get Custom Env Variables, Class name = S (started execution), Arg 1: undefined, Arg 2: "RunPythonCode" info 20:47:53.613: LSP Notebooks experiment is enabled debug 20:47:53.613: Get Active Interpreter, Class name = x (started execution), Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio" debug 20:47:53.615: getCondaFile, Class name = k (started execution) debug 20:47:53.615: getCondaVersion, Class name = k (started execution) debug 20:47:53.615: getCondaVersionFromPython, Class name = k (started execution) debug 20:47:53.615: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 20:47:53.667: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 20:47:54.672: Get Active Interpreter, Class name = x (started execution), Arg 1: undefined debug 20:47:54.696: Get Custom Env Variables, Class name = S, completed in 1085ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode" debug 20:47:54.697: Get Jupyter Sub Paths, Class name = j, completed in 1086ms, has a truthy return value, Arg 1: "", Arg 2: "kernels", Return Value: debug 20:47:54.698: Get Jupyter Kernel Paths, Class name = j, completed in 1087ms, has a truthy return value, Arg 1: "", Return Value: debug 20:47:54.698: Getting Jupyter KernelSpec Root Path, Class name = j, completed in 0ms, has a truthy return value, , Return Value: debug 20:47:54.698: Get KernelSpec root path, Class name = j, completed in 1087ms, has a truthy return value, Arg 1: {"_isCancelled":false,"_emitter":null}, Return Value: , debug 20:47:54.757: Loading kernelspec from c:\Users\Michael Pearce\AppData\Roaming\jupyter\kernels\ir\kernel.json for debug 20:47:54.760: Getting Jupyter KernelSpec Root Path, Class name = j, completed in 1ms, has a truthy return value, , Return Value: debug 20:47:54.808: Get Active Interpreter, Class name = x, completed in 136ms, has a falsy return value, Arg 1: undefined, Return Value: undefined debug 20:47:54.808: Get Active Interpreter, Class name = x, completed in 1195ms, has a falsy return value, Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio", Return Value: undefined debug 20:47:54.808: Get Active Interpreter, Class name = x, completed in 1193ms, has a falsy return value, Arg 1: undefined, Return Value: undefined debug 20:47:54.808: Get Active Interpreter, Class name = x, completed in 1141ms, has a falsy return value, Arg 1: undefined, Return Value: undefined debug 20:47:54.840: getCondaVersionFromPython, Class name = k, completed in 1225ms, has a falsy return value debug 20:47:54.840: getCondaFile, Class name = k, completed in 1225ms, has a truthy return value debug 20:47:54.840: getCondaVersion, Class name = k, completed in 1225ms, has a falsy return value debug 20:47:54.844: Full interpreter list after refreshing (total 1193ms, resolve 1037ms, refresh 156ms) is length: 0, debug 20:47:54.845: Full interpreter list is length: 0, debug 20:47:54.846: Found 1 cached controllers debug 20:47:54.846: Creating 1 controllers debug 20:47:54.846: Creating notebook controller for startUsingLocalKernelSpec & view jupyter-notebook (id='.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 20:47:54.847: Creating notebook controller for startUsingLocalKernelSpec & view interactive (id='.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 20:47:54.847: Found 1 cached controllers debug 20:47:54.847: Creating 1 controllers info 20:47:54.850: Preferred Remote kernel for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb is undefined debug 20:47:54.956: Rank Kernels, Class name = p (started execution), Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb", Arg 2: "", Arg 3: {"kernelspec":{"display_name":"R","language":"R","name":"ir"},"language_info":{"name":"R"},"orig_nbformat":4}, Arg 4: undefined, Arg 5: "", Arg 6: undefined info 20:47:54.956: Preferred Remote kernel for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb is undefined info 20:47:54.956: Find preferred kernel for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb with metadata {"kernelspec":{"display_name":"R","language":"R","name":"ir"},"language_info":{"name":"R"},"orig_nbformat":4} & preferred interpreter debug 20:47:54.958: Rank Kernels, Class name = p, completed in 2ms, has a truthy return value, Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb", Arg 2: "", Arg 3: {"kernelspec":{"display_name":"R","language":"R","name":"ir"},"language_info":{"name":"R"},"orig_nbformat":4}, Arg 4: undefined, Arg 5: "", Arg 6: undefined info 20:47:54.958: Preferred Remote kernel for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb is undefined info 20:47:54.958: Preferred kernel .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} is exact match or top match for non python kernels, (true, undefined, true, true) info 20:47:54.959: PreferredConnection: .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} found for NotebookDocument: c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb debug 20:47:54.959: TargetController found ID: startUsingLocalKernelSpec:.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for document c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb debug 20:47:54.960: Compute Preferred Controller, Class name = k, completed in 4ms, has a truthy return value, Arg 1: , Arg 2: undefined, Arg 3: {"_isCancelled":false,"_emitter":{"_disposed":false,"_listeners":{"_first":{},"_last":{},"_size":0}}}, Return Value: debug 20:47:55.295: _jupyterPythonPathFunction: "file:///c%3A/Users/Michael%20Pearce/Documents/Code/colleen-rstudio" is not a notebook debug 20:48:06.881: VSCodeNotebookController::handleExecution, Class name = x (started execution) debug 20:48:06.882: KernelProvider switched kernel to id = .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} debug 20:48:06.882: start the kernel, options.disableUI=true for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb debug 20:48:06.883: Start Jupyter Session in kernel.ts with disableUI = true debug 20:48:06.883: Initialize notebook communications for editor c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb debug 20:48:06.883: Resolving notebook UI Comms (resolve) for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb debug 20:48:06.883: initialize CommonMessageCoordinator debug 20:48:06.899: Registering commtarget jupyter.widget debug 20:48:06.899: IPyWidgetMessageDispatcher.initialize debug 20:48:06.899: Controller selection change completed debug 20:48:06.899: Execute Cell 0 c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb debug 20:48:06.900: start the kernel, options.disableUI=false for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb info 20:48:06.900: Starting Jupyter Session startUsingLocalKernelSpec, .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for 'c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb' (disableUI=false) debug 20:48:06.901: Creating raw notebook for resource 'c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb' info 20:48:06.901: Computing working directory for resource 'c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb' debug 20:48:06.901: Storing Preferred remote kernel for c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb is undefined debug 20:48:06.902: Kernel Launcher. launch, Class name = r (started execution), Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb", Arg 4: "~\\Documents\\Code\\colleen-rstudio", Arg 5: {"_isCancelled":false,"_emitter":null} debug 20:48:06.933: Launching kernel in kernelProcess.ts, Class name = x (started execution), Arg 1: "~\\Documents\\Code\\colleen-rstudio", Arg 2: "" info 20:48:06.933: Launching Raw Kernel & not daemon R # C:/PROGRA~1/R/R-42~1.1/bin/x64/R debug 20:48:06.933: Create ProcessService, Class name = h (started execution), Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb" debug 20:48:06.933: Get Custom Env Variables, Class name = S (started execution), Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb", Arg 2: "RunNonPythonCode" debug 20:48:06.934: Get Custom Env Variables, Class name = S, completed in 1ms, has a truthy return value, Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb", Arg 2: "RunNonPythonCode" debug 20:48:06.934: Create ProcessService, Class name = h, completed in 1ms, has a truthy return value, Arg 1: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb" info 20:48:06.934: No custom variables nor do we have a conda environment info 20:48:06.936: Process Execution: > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-26972LVwsajc0A2Cp.json" > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-26972LVwsajc0A2Cp.json" info 20:48:06.936: Process Execution: cwd: ~\Documents\Code\colleen-rstudio cwd: ~\Documents\Code\colleen-rstudio debug 20:48:06.936: Launching kernel in kernelProcess.ts, Class name = x, completed in 3ms, has a truthy return value, Arg 1: "~\\Documents\\Code\\colleen-rstudio", Arg 2: "" error 20:48:06.939: Kernel died [Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R', path: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-26972LVwsajc0A2Cp.json"' ] } error 20:48:06.940: Disposing kernel process due to an error [Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R', path: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-26972LVwsajc0A2Cp.json"' ] } error 20:48:06.940: info 20:48:06.940: Dispose Kernel process undefined. debug 20:48:06.941: Disposed Kernel process undefined. error 20:48:06.943: Kernel Launcher. launch, Class name = r, completed in 41ms, has a falsy return value, Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Michael Pearce/Documents/Code/colleen-rstudio/test.ipynb", Arg 4: "~\\Documents\\Code\\colleen-rstudio", Arg 5: [i [Error]: at new r (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R', path: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-26972LVwsajc0A2Cp.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } error 20:48:06.944: Failed to connect raw kernel session: Error: The kernel died. Error: ... View Jupyter [log](command:jupyter.viewOutput) for further details. debug 20:48:06.944: Shutdown session -- complete warn 20:48:06.945: Error occurred while trying to start the kernel, options.disableUI=false [i [Error]: at new r (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R', path: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-26972LVwsajc0A2Cp.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } warn 20:48:06.945: Kernel Error, context = start [i [Error]: at new r (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R', path: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-26972LVwsajc0A2Cp.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } debug 20:48:06.946: Are Dependencies Installed, Class name = I, completed in 0ms, has a truthy return value, Arg 1: ".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}", Arg 2: undefined, Arg 3: true, Return Value: true info 20:48:06.949: Dispose Kernel 'c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb' associated with 'c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb' debug 20:48:06.949: Kernel got disposed, hence there is no longer a kernel associated with c:\Users\Michael Pearce\Documents\Code\colleen-rstudio\test.ipynb error 20:48:06.950: Error in execution [i [Error]: at new r (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R', path: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-26972LVwsajc0A2Cp.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } error 20:48:06.950: Error in execution (get message for cell) [i [Error]: at new r (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:17:33247) at new o (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1761997) at new i (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:1741797) at x.launch (c:\Users\Michael Pearce\.vscode\extensions\ms-toolsai.jupyter-2022.11.1003281132\out\extension.node.js:2:2145231) at process.processTicksAndRejections (node:internal/process/task_queues:96:5) Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { category: 'unknown', originalException: [Error: spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R ENOENT at ChildProcess._handle.onexit (node:internal/child_process:283:19) at onErrorNT (node:internal/child_process:478:16) at process.processTicksAndRejections (node:internal/process/task_queues:83:21)] { errno: -4058, code: 'ENOENT', syscall: 'spawn C:/PROGRA~1/R/R-42~1.1/bin/x64/R', path: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', spawnargs: [ '--slave', '-e', 'IRkernel::main()', '--args', '"c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-26972LVwsajc0A2Cp.json"' ] }, kernelConnectionMetadata: h { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Michael Pearce\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, stdErr: '\n\n' } debug 20:48:07.055: VSCodeNotebookController::handleExecution, Class name = x, completed in 174ms, has a falsy return value debug 20:48:07.169: IPyWidgetMessageDispatcher.initialize ```
DonJayamanne commented 1 year ago

Closing as fixed, this should be fixed in the latest pre-release version If this does not work in the latest pre-release and vscode insiders, please do let me know and I will re-open this issue Or pelase feel free to re-open this issue or create a new one.

Screenshot 2023-02-04 at 09 24 37
iAhtasham commented 1 year ago

I am facing this issue, and I am not able to find a working solution yet, I tried pre-release

jlgraves-ubc commented 1 year ago

@DonJayamanne

Sorry to report but it still does not work. Same issue as above.

masharifi01 commented 1 year ago

The problem still exists, I tried pre-released too, but I still get the error

DonJayamanne commented 1 year ago

@masharifi01 Please could you enable logging as follows:

masharifi01 commented 1 year ago

here is the output

Show Logs ``` > debug 16:31:17.120: VSCodeNotebookController::handleExecution, Class name = Lv (started execution) debug 16:31:17.120: Execute Cell 0 Untitled-1.ipynb debug 16:31:17.121: start the kernel, options.disableUI=false for Untitled-1.ipynb debug 16:31:17.121: Start Jupyter Session in kernel.ts with disableUI = false info 16:31:17.122: Starting Jupyter Session startUsingLocalKernelSpec, .ir.e:\R-4.2.2\bin\x64\R.\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for 'Untitled-1.ipynb' (disableUI=false) debug 16:31:17.123: Creating raw notebook for resource 'Untitled-1.ipynb' debug 16:31:17.123: Computing working directory for resource 'Untitled-1.ipynb' debug 16:31:17.125: Kernel Launcher. launch, Class name = Wp (started execution), Arg 1: {"id":".ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["E:/R-4.2.2/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"E:/R-4.2.2/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "Untitled-1.ipynb", Arg 4: "e:\\Microsoft VS Code", Arg 5: {"a":false,"b":null} debug 16:31:17.211: Launching kernel in kernelProcess.ts, Class name = Mp (started execution), Arg 1: "e:\\Microsoft VS Code", Arg 2: "" info 16:31:17.211: Launching Raw Kernel R # E:/R-4.2.2/bin/x64/R debug 16:31:17.211: Create ProcessService, Class name = ml (started execution), Arg 1: "Untitled-1.ipynb" debug 16:31:17.211: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: "Untitled-1.ipynb", Arg 2: "RunNonPythonCode" debug 16:31:17.212: Cached data exists getEnvironmentVariables, Untitled-1.ipynb debug 16:31:17.212: Get Custom Env Variables, Class name = Vl, completed in 1ms, has a truthy return value, Arg 1: "Untitled-1.ipynb", Arg 2: "RunNonPythonCode" debug 16:31:17.212: Create ProcessService, Class name = ml, completed in 1ms, has a truthy return value, Arg 1: "Untitled-1.ipynb" debug 16:31:17.212: No custom variables nor do we have a conda environment info 16:31:17.220: Process Execution: > E:/R-4.2.2/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json" > E:/R-4.2.2/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json" info 16:31:17.220: Process Execution: cwd: e:\Microsoft VS Code cwd: e:\Microsoft VS Code debug 16:31:17.221: Launching kernel in kernelProcess.ts, Class name = Mp, completed in 10ms, has a truthy return value, Arg 1: "e:\\Microsoft VS Code", Arg 2: "" debug 16:31:18.136: KernelProcess error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument warn 16:31:18.137: StdErr from Kernel Process Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument debug 16:31:18.137: KernelProcess error: Execution halted warn 16:31:18.137: StdErr from Kernel Process Execution halted debug 16:31:18.161: KernelProcess Exit Exit - 1 Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted error 16:31:18.161: Disposing kernel process due to an error [Tp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Mohammad Amin\.vscode\extensions\ms-toolsai.jupyter-2023.2.1000541047\out\extension.node.js:17:90652) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: Qs { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'E:/R-4.2.2/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 16:31:18.166: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted info 16:31:18.166: Dispose Kernel process 15864. debug 16:31:18.167: Disposed Kernel process 15864. error 16:31:18.169: Kernel Launcher. launch, Class name = Wp, completed in 1044ms, has a falsy return value, Arg 1: {"id":".ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["E:/R-4.2.2/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"E:/R-4.2.2/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "Untitled-1.ipynb", Arg 4: "e:\\Microsoft VS Code", Arg 5: [Tp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Mohammad Amin\.vscode\extensions\ms-toolsai.jupyter-2023.2.1000541047\out\extension.node.js:17:90652) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: Qs { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'E:/R-4.2.2/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 16:31:18.169: Failed to connect raw kernel session: Error: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. debug 16:31:18.170: Shutdown session -- complete warn 16:31:18.170: Error occurred while trying to start the kernel, options.disableUI=false [Tp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Mohammad Amin\.vscode\extensions\ms-toolsai.jupyter-2023.2.1000541047\out\extension.node.js:17:90652) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: Qs { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'E:/R-4.2.2/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument\r\n` + 'Execution halted\r\n' } warn 16:31:18.171: Kernel Error, context = start [Tp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Mohammad Amin\.vscode\extensions\ms-toolsai.jupyter-2023.2.1000541047\out\extension.node.js:17:90652) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: Qs { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'E:/R-4.2.2/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 16:31:18.172: Are Dependencies Installed, Class name = Hu, completed in 1ms, has a truthy return value, Arg 1: ".ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}", Arg 2: undefined, Arg 3: true, Return Value: true info 16:31:18.177: Dispose Kernel 'Untitled-1.ipynb' associated with 'Untitled-1.ipynb' debug 16:31:18.178: Kernel got disposed, hence there is no longer a kernel associated with Untitled-1.ipynb error 16:31:18.180: Error in execution [Tp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Mohammad Amin\.vscode\extensions\ms-toolsai.jupyter-2023.2.1000541047\out\extension.node.js:17:90652) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: Qs { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'E:/R-4.2.2/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 16:31:18.180: Start cell 0 execution @ undefined error 16:31:18.181: Error in execution (get message for cell) [Tp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Mohammad Amin\AppData\Roaming\jupyter\runtime\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Mohammad Amin\.vscode\extensions\ms-toolsai.jupyter-2023.2.1000541047\out\extension.node.js:17:90652) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: Qs { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'E:/R-4.2.2/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.e:\\R-4.2.2\\bin\\x64\\R.\\.e:/r-4.2.2/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Mohammad Amin\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-16800nvpNCbly83Mf.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 16:31:18.214: End cell 0 execution @ undefined, started @ undefined, elapsed time = 0s debug 16:31:18.214: VSCodeNotebookController::handleExecution, Class name = Lv, completed in 1094ms, has a falsy return value ```
DonJayamanne commented 1 year ago

This should now be fixed in the latest pre-release version of the Jupyter extension.

Screenshot 2023-02-04 at 09 24 37
DonJayamanne commented 1 year ago

If this still does not work in the latest pre-release version of the Jupyter extesnion, then please do enable logging and share the logs here Please could you enable logging as follows:

jlgraves-ubc commented 1 year ago

Sorry, still no dice:

Show Logs ``` info 13:23:07.905: Loading webview. View is notset info 13:23:07.905: Loading web view... info 13:23:07.906: Webview panel created. info 13:23:08.395: Web view react rendered debug 13:23:10.041: VSCodeNotebookController::handleExecution, Class name = db (started execution) debug 13:23:10.041: Execute Cell 0 c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 13:23:10.042: start the kernel, options.disableUI=false for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 13:23:10.042: Start Jupyter Session in kernel.ts with disableUI = false info 13:23:10.042: Starting Jupyter Session startUsingLocalKernelSpec, .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' (disableUI=false) debug 13:23:10.043: Creating raw notebook for resource 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 13:23:10.043: Computing working directory for resource 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 13:23:10.044: Kernel Launcher. launch, Class name = ah (started execution), Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 4: "~\\Desktop\\Test", Arg 5: {"a":false,"b":null} debug 13:23:10.102: Launching kernel in kernelProcess.ts, Class name = th (started execution), Arg 1: "~\\Desktop\\Test", Arg 2: "" info 13:23:10.102: Launching Raw Kernel R # C:/PROGRA~1/R/R-42~1.1/bin/x64/R debug 13:23:10.102: Create ProcessService, Class name = kl (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: debug 13:23:10.102: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: "RunNonPythonCode", Arg 3: debug 13:23:10.104: Get Custom Env Variables, Class name = Vl, completed in 2ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: "RunNonPythonCode", Arg 3: debug 13:23:10.104: Create ProcessService, Class name = kl, completed in 2ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: debug 13:23:10.104: No custom variables nor do we have a conda environment debug 13:23:10.104: Kernel Env Variables for c:\Users\Jonathan Graves\AppData\Roaming\jupyter\kernels\ir\kernel.json, PATH value is C:\Program Files\Google\Chrome\Application;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\Python;C:\Python\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin info 13:23:10.114: Process Execution: > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json" > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json" info 13:23:10.114: Process Execution: cwd: ~\Desktop\Test cwd: ~\Desktop\Test debug 13:23:10.115: Launching kernel in kernelProcess.ts, Class name = th, completed in 13ms, has a truthy return value, Arg 1: "~\\Desktop\\Test", Arg 2: "" debug 13:23:10.957: KernelProcess error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument warn 13:23:10.957: StdErr from Kernel Process Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument debug 13:23:10.957: KernelProcess error: Execution halted warn 13:23:10.957: StdErr from Kernel Process Execution halted debug 13:23:10.978: KernelProcess Exit Exit - 1 Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted error 13:23:10.979: Disposing kernel process due to an error [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 13:23:10.982: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted info 13:23:10.982: Dispose Kernel process 17736. debug 13:23:10.982: Disposed Kernel process 17736. error 13:23:10.983: Kernel Launcher. launch, Class name = ah, completed in 939ms, has a falsy return value, Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 4: "~\\Desktop\\Test", Arg 5: [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 13:23:10.983: Failed to connect raw kernel session: Error: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. debug 13:23:10.983: Shutdown session -- complete warn 13:23:10.983: Error occurred while trying to start the kernel, options.disableUI=false [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument\r\n` + 'Execution halted\r\n' } warn 13:23:10.983: Kernel Error, context = start [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 13:23:10.984: Are Dependencies Installed, Class name = dp, completed in 0ms, has a truthy return value, Arg 1: ".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}", Arg 2: undefined, Arg 3: true, Return Value: true info 13:23:10.985: Dispose Kernel 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' associated with 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 13:23:10.985: Kernel got disposed, hence there is no longer a kernel associated with c:\Users\Jonathan Graves\Desktop\Test\test.ipynb error 13:23:10.986: Error in execution [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 13:23:10.986: Start cell 0 execution @ undefined error 13:23:10.987: Error in execution (get message for cell) [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: undefined, isRegisteredByVSC: undefined, name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-1796ocT8ThKfqxpe.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 13:23:11.021: End cell 0 execution @ undefined, started @ undefined, elapsed time = 0s debug 13:23:11.021: VSCodeNotebookController::handleExecution, Class name = db, completed in 980ms, has a falsy return value ```
DonJayamanne commented 1 year ago

@jlgraves-ubc Please could you share all of the logs, the start of the logs is important as that contains information about the Juptyer extension and the like.

jlgraves-ubc commented 1 year ago

Sorry, didn't realized it was cutoff.

Show Logs ``` Visual Studio Code - Insiders (1.77.0-insider, undefined, desktop) Jupyter Extension Version: 2023.3.1000820547. Python Extension Version: 2023.5.10791707. No workspace folder opened. User belongs to experiment group 'jupyterEnhancedDataViewer' User belongs to experiment group 'jupyterTestcf' debug 15:33:49.648: Updating cache with Python kernels , Added = , Updated = , Removed = debug 15:33:49.650: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: undefined, Arg 2: "RunPythonCode" debug 15:33:49.651: Start refreshing Kernel Picker (1679438029651) debug 15:33:49.652: Found 0 cached controllers info 15:33:49.655: LSP Notebooks experiment is enabled debug 15:33:49.655: Get Active Interpreter, Class name = as (started execution), Arg 1: undefined debug 15:33:49.671: Get Custom Env Variables, Class name = Vl, completed in 21ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode" debug 15:33:49.675: Get Jupyter Sub Paths, Class name = Dp, completed in 25ms, has a truthy return value, Arg 1: "", Arg 2: "kernels", Return Value: debug 15:33:49.675: Listing kernels for 0 interpreters () debug 15:33:49.676: Get Jupyter Kernel Paths, Class name = Dp, completed in 26ms, has a truthy return value, Arg 1: "", Return Value: debug 15:33:49.678: Get KernelSpec root path, Class name = Dp, completed in 28ms, has a truthy return value, Arg 1: {"a":false,"b":null}, Return Value: , debug 15:33:49.685: Found 2 cached controllers debug 15:33:49.685: Creating 2 controllers debug 15:33:49.685: Creating notebook controller for startUsingLocalKernelSpec & view jupyter-notebook (id='.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 15:33:49.686: Creating notebook controller for startUsingLocalKernelSpec & view interactive (id='.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 15:33:49.686: Creating notebook controller for startUsingLocalKernelSpec & view jupyter-notebook (id='.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 15:33:49.686: Creating notebook controller for startUsingLocalKernelSpec & view interactive (id='.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R' debug 15:33:49.687: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Updated = , Removed = debug 15:33:49.691: No controller, hence notebook communications cannot be initialized for editor c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:33:49.919: Loading kernelspec from c:\Users\Jonathan Graves\AppData\Roaming\jupyter\kernels\ir\kernel.json for debug 15:33:49.919: Loading kernelspec from c:\ProgramData\jupyter\kernels\ir\kernel.json for debug 15:33:50.005: Get Active Interpreter, Class name = as (started execution), Arg 1: undefined debug 15:33:50.202: Get Active Interpreter, Class name = as, completed in 547ms, has a truthy return value, Arg 1: undefined, Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 15:33:50.222: Get Active Interpreter, Class name = as, completed in 217ms, has a truthy return value, Arg 1: undefined, Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 15:33:50.223: interpreterPackages getPackageInformation, Class name = Kd (started execution), Arg 1: {"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} debug 15:33:50.223: Create activated Env, Class name = du (started execution), Arg 1: {"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} debug 15:33:50.223: Getting activated env variables, Class name = hc (started execution), Arg 1: undefined, Arg 2: debug 15:33:50.223: Getting activated env variables impl, Class name = hc (started execution), Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:33:50.223: Getting activated env variables from Python, Class name = hc (started execution), Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:33:50.223: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: undefined, Arg 2: "RunPythonCode" debug 15:33:50.224: Get Custom Env Variables, Class name = Vl, completed in 1ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode" warn 15:33:50.416: Failed to get activated env vars for c:\Python\python.exe in 193ms debug 15:33:50.417: Create ProcessService, Class name = kl (started execution), Arg 1: undefined debug 15:33:50.417: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: undefined, Arg 2: "RunNonPythonCode", Arg 3: undefined debug 15:33:50.418: Get Custom Env Variables, Class name = Vl, completed in 1ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunNonPythonCode", Arg 3: undefined debug 15:33:50.419: Create ProcessService, Class name = kl, completed in 2ms, has a truthy return value, Arg 1: undefined info 15:33:50.425: Process Execution: > c:\Python\python.exe -c "import site;print("USER_BASE_VALUE");print(site.USER_SITE);print("USER_BASE_VALUE");" > c:\Python\python.exe -c "import site;print("USER_BASE_VALUE");print(site.USER_SITE);print("USER_BASE_VALUE");" debug 15:33:50.816: USER_SITE for c:\Python\python.exe is c:\Users\Jonathan Graves\AppData\Roaming\Python\Python311\Scripts debug 15:33:50.816: Prepend PATH with user site path for C:\PYTHON\PYTHON.EXE, user site c:\Users\Jonathan Graves\AppData\Roaming\Python\Python311\Scripts debug 15:33:50.816: Prepend PATH with python bin for C:\PYTHON\PYTHON.EXE, PATH value is c:\Users\Jonathan Graves\AppData\Roaming\Python\Python311\Scripts;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin and Path value is c:\Users\Jonathan Graves\AppData\Roaming\Python\Python311\Scripts;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin debug 15:33:50.816: Activated Env Variables for C:\PYTHON\PYTHON.EXE, PATH value is c:\Python;c:\Users\Jonathan Graves\AppData\Roaming\Python\Python311\Scripts;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin and Path value is c:\Python;c:\Users\Jonathan Graves\AppData\Roaming\Python\Python311\Scripts;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin debug 15:33:50.817: Getting activated env variables from Python, Class name = hc, completed in 594ms, has a truthy return value, Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:33:50.817: Got env vars with python c:\Python\python.exe in 594ms with 57 variables debug 15:33:50.817: Getting activated env variables impl, Class name = hc, completed in 594ms, has a truthy return value, Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:33:50.817: Getting activated env variables, Class name = hc, completed in 594ms, has a truthy return value, Arg 1: undefined, Arg 2: debug 15:33:50.817: Create activated Env, Class name = du, completed in 594ms, has a truthy return value, Arg 1: {"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} info 15:33:50.821: Process Execution: > c:\Python\python.exe -m pip list > c:\Python\python.exe -m pip list debug 15:33:53.022: interpreterPackages getPackageInformation, Class name = Kd, completed in 2799ms, has a falsy return value, Arg 1: {"interpreter":{"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"external":"file:///c%3A/Python/python.exe","path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}}} debug 15:33:53.280: Conda file returned by Python Extension is conda debug 15:33:54.155: Python API env change detected, update => 'C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE' debug 15:33:54.244: Python API env change detected, update => 'C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE' debug 15:33:54.252: Python API env change detected, update => 'C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE' debug 15:33:54.253: Full interpreter list after refreshing (total 1ms, resolve 1ms, refresh 0ms) is length: 6, C:\PYTHON\PYTHON.EXE:undefined::c:\Python\python.exe:C:\Python\python.exe, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE:base:Conda:c:\ProgramData\Miniconda3\python.exe:C:\ProgramData\Miniconda3\python.exe, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE:r:Conda:c:\ProgramData\Miniconda3\envs\r\python.exe:C:\ProgramData\Miniconda3\envs\r\python.exe, C:\CONDA_ENVS\R2\PYTHON.EXE:r2:Conda:c:\conda_envs\r2\python.exe:C:\conda_envs\r2\python.exe, C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE:example_environment:Conda::C:\conda_envs\example_environment, C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE:id_scan:Conda:c:\conda_envs\id_scan\python.exe:C:\conda_envs\id_scan\python.exe debug 15:33:54.255: Refreshed Environments debug 15:33:54.255: Refreshed Environments debug 15:33:54.255: Python environment for C:\PYTHON\PYTHON.EXE is C:\PYTHON\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\Python\\python.exe","id":"C:\\PYTHON\\PYTHON.EXE","executable":{"uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\Python"},"version":{"major":3,"minor":11,"micro":0,"release":{"level":"final","serial":0},"sysVersion":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"},"tools":[]},"id":"C:\\PYTHON\\PYTHON.EXE"} and original env is {"internal":{"path":"C:\\Python\\python.exe","id":"C:\\PYTHON\\PYTHON.EXE","executable":{"uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\Python"},"version":{"major":3,"minor":11,"micro":0,"release":{"level":"final","serial":0},"sysVersion":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"},"tools":[]},"id":"C:\\PYTHON\\PYTHON.EXE"} and translated is {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 15:33:54.256: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.256: loadData after detecting changes to interpreters debug 15:33:54.256: Updating cache with Python kernels , Added = , Updated = , Removed = debug 15:33:54.256: refreshData after detecting changes to interpreters debug 15:33:54.257: Listing kernels for 2 interpreters (C:\PYTHON\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE) debug 15:33:54.257: Listing Python & non-Python kernels for Interpreter c:\Python\python.exe debug 15:33:54.257: Finding kernel specs for C:\PYTHON\PYTHON.EXE interpreters: => file:///c%3A/Python/python.exe debug 15:33:54.257: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 15:33:54.257: Finding kernel specs for C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE interpreters: base => file:///c%3A/ProgramData/Miniconda3/python.exe debug 15:33:54.258: Python environment for C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE is C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\ProgramData\\Miniconda3\\python.exe","id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\ProgramData\\Miniconda3"},"environment":{"type":"Conda","name":"base","folderUri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3","scheme":"file"}},"version":{"major":3,"minor":9,"micro":12,"release":{"level":"final","serial":0},"sysVersion":"3.9.12 (main, Apr 4 2022, 05:22:27) [MSC v.1916 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE"} and original env is {"internal":{"path":"C:\\ProgramData\\Miniconda3\\python.exe","id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\ProgramData\\Miniconda3"},"environment":{"type":"Conda","name":"base","folderUri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3","scheme":"file"}},"version":{"major":3,"minor":9,"micro":12,"release":{"level":"final","serial":0},"sysVersion":"3.9.12 (main, Apr 4 2022, 05:22:27) [MSC v.1916 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE"} and translated is {"id":"C:\\PROGRAMDATA\\MINICONDA3\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3","envPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3","scheme":"file"},"displayPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3","scheme":"file"},"envName":"base","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\python.exe","_sep":1,"external":"file:///c%3A/ProgramData/Miniconda3/python.exe","path":"/C:/ProgramData/Miniconda3/python.exe","scheme":"file"},"displayName":"base","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":9,"patch":12,"raw":"3.9.12 (main, Apr 4 2022, 05:22:27) [MSC v.1916 64 bit (AMD64)]"}} debug 15:33:54.258: Get Jupyter Kernel Paths, Class name = Dp, completed in 1ms, has a truthy return value, Arg 1: "", Return Value: debug 15:33:54.258: Get Jupyter Kernel Paths, Class name = Dp, completed in 1ms, has a truthy return value, Arg 1: "", Return Value: debug 15:33:54.259: Get KernelSpec root path, Class name = Dp, completed in 2ms, has a truthy return value, Arg 1: {"a":false,"b":null}, Return Value: , debug 15:33:54.259: Searching for kernel specs in interpreter C:\PYTHON\PYTHON.EXE in path c:\Python\share\jupyter\kernels debug 15:33:54.259: Get KernelSpec root path, Class name = Dp, completed in 2ms, has a truthy return value, Arg 1: {"a":false,"b":null}, Return Value: , debug 15:33:54.259: Searching for kernel specs in interpreter C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE in path c:\ProgramData\Miniconda3\share\jupyter\kernels debug 15:33:54.260: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.260: loadData after detecting changes to interpreters debug 15:33:54.260: Updating cache with Python kernels , Added = , Updated = , Removed = debug 15:33:54.260: refreshData after detecting changes to interpreters debug 15:33:54.260: Listing kernels for 3 interpreters (C:\PYTHON\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE) debug 15:33:54.260: Listing Python & non-Python kernels for Interpreter c:\Python\python.exe debug 15:33:54.260: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 15:33:54.260: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 15:33:54.260: Finding kernel specs for C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE interpreters: r => file:///c%3A/ProgramData/Miniconda3/envs/r/python.exe debug 15:33:54.261: Python environment for C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE is C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r"},"environment":{"type":"Conda","name":"r","folderUri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"}},"version":{"major":3,"minor":10,"micro":6,"release":{"level":"final","serial":0},"sysVersion":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE"} and original env is {"internal":{"path":"C:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r"},"environment":{"type":"Conda","name":"r","folderUri":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"}},"version":{"major":3,"minor":10,"micro":6,"release":{"level":"final","serial":0},"sysVersion":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE"} and translated is {"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r","envPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"displayPath":{"$mid":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"envName":"r","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","_sep":1,"external":"file:///c%3A/ProgramData/Miniconda3/envs/r/python.exe","path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"displayName":"r","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}} debug 15:33:54.262: Get Jupyter Kernel Paths, Class name = Dp, completed in 2ms, has a truthy return value, Arg 1: "", Return Value: debug 15:33:54.262: Get KernelSpec root path, Class name = Dp, completed in 2ms, has a truthy return value, Arg 1: {"a":false,"b":null}, Return Value: , debug 15:33:54.262: Searching for kernel specs in interpreter C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE in path c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels debug 15:33:54.263: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.263: loadData after detecting changes to interpreters debug 15:33:54.263: Updating cache with Python kernels , Added = , Updated = , Removed = debug 15:33:54.263: refreshData after detecting changes to interpreters debug 15:33:54.263: Listing kernels for 4 interpreters (C:\PYTHON\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE, C:\CONDA_ENVS\R2\PYTHON.EXE) debug 15:33:54.263: Listing Python & non-Python kernels for Interpreter c:\Python\python.exe debug 15:33:54.263: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 15:33:54.263: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 15:33:54.263: Listing Python & non-Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 15:33:54.263: Finding kernel specs for C:\CONDA_ENVS\R2\PYTHON.EXE interpreters: r2 => file:///c%3A/conda_envs/r2/python.exe debug 15:33:54.264: Python environment for C:\CONDA_ENVS\R2\PYTHON.EXE is C:\CONDA_ENVS\R2\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\conda_envs\\r2\\python.exe","id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/conda_envs/r2/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\conda_envs\\r2"},"environment":{"type":"Conda","name":"r2","folderUri":{"$mid":1,"path":"/C:/conda_envs/r2","scheme":"file"}},"version":{"major":3,"minor":10,"micro":6,"release":{"level":"final","serial":0},"sysVersion":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE"} and original env is {"internal":{"path":"C:\\conda_envs\\r2\\python.exe","id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/conda_envs/r2/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\conda_envs\\r2"},"environment":{"type":"Conda","name":"r2","folderUri":{"$mid":1,"path":"/C:/conda_envs/r2","scheme":"file"}},"version":{"major":3,"minor":10,"micro":6,"release":{"level":"final","serial":0},"sysVersion":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE"} and translated is {"id":"C:\\CONDA_ENVS\\R2\\PYTHON.EXE","sysPrefix":"C:\\conda_envs\\r2","envPath":{"$mid":1,"path":"/C:/conda_envs/r2","scheme":"file"},"displayPath":{"$mid":1,"path":"/C:/conda_envs/r2","scheme":"file"},"envName":"r2","uri":{"$mid":1,"fsPath":"c:\\conda_envs\\r2\\python.exe","_sep":1,"external":"file:///c%3A/conda_envs/r2/python.exe","path":"/C:/conda_envs/r2/python.exe","scheme":"file"},"displayName":"r2","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}} debug 15:33:54.264: Get Jupyter Kernel Paths, Class name = Dp, completed in 1ms, has a truthy return value, Arg 1: "", Return Value: debug 15:33:54.265: Get KernelSpec root path, Class name = Dp, completed in 2ms, has a truthy return value, Arg 1: {"a":false,"b":null}, Return Value: , debug 15:33:54.265: Searching for kernel specs in interpreter C:\CONDA_ENVS\R2\PYTHON.EXE in path c:\conda_envs\r2\share\jupyter\kernels debug 15:33:54.265: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.265: loadData after detecting changes to interpreters debug 15:33:54.265: Updating cache with Python kernels , Added = , Updated = , Removed = debug 15:33:54.265: refreshData after detecting changes to interpreters debug 15:33:54.266: Listing kernels for 5 interpreters (C:\PYTHON\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE, C:\CONDA_ENVS\R2\PYTHON.EXE, C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE) debug 15:33:54.266: Listing Python & non-Python kernels for Interpreter c:\Python\python.exe debug 15:33:54.266: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 15:33:54.266: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 15:33:54.266: Listing Python & non-Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 15:33:54.266: Listing Python & non-Python kernels for Interpreter c:\conda_envs\example_environment\python.exe debug 15:33:54.266: Finding kernel specs for C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE interpreters: example_environment => file:///c%3A/conda_envs/example_environment/python.exe debug 15:33:54.267: Python environment for C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE is C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\conda_envs\\example_environment","id":"C:\\CONDA_ENVS\\EXAMPLE_ENVIRONMENT\\PYTHON.EXE","executable":{"bitness":"Unknown"},"environment":{"type":"Conda","name":"example_environment","folderUri":{"$mid":1,"path":"/C:/conda_envs/example_environment","scheme":"file"}},"tools":["Conda"]},"id":"C:\\CONDA_ENVS\\EXAMPLE_ENVIRONMENT\\PYTHON.EXE"} and original env is {"internal":{"path":"C:\\conda_envs\\example_environment","id":"C:\\CONDA_ENVS\\EXAMPLE_ENVIRONMENT\\PYTHON.EXE","executable":{"bitness":"Unknown"},"environment":{"type":"Conda","name":"example_environment","folderUri":{"$mid":1,"path":"/C:/conda_envs/example_environment","scheme":"file"}},"tools":["Conda"]},"id":"C:\\CONDA_ENVS\\EXAMPLE_ENVIRONMENT\\PYTHON.EXE"} and translated is {"id":"C:\\CONDA_ENVS\\EXAMPLE_ENVIRONMENT\\PYTHON.EXE","sysPrefix":"c:\\conda_envs\\example_environment","envPath":{"$mid":1,"fsPath":"c:\\conda_envs\\example_environment","_sep":1,"path":"/C:/conda_envs/example_environment","scheme":"file"},"displayPath":{"$mid":1,"fsPath":"c:\\conda_envs\\example_environment","_sep":1,"path":"/C:/conda_envs/example_environment","scheme":"file"},"envName":"example_environment","uri":{"$mid":1,"fsPath":"c:\\conda_envs\\example_environment\\python.exe","_sep":1,"external":"file:///c%3A/conda_envs/example_environment/python.exe","path":"/C:/conda_envs/example_environment/python.exe","scheme":"file"},"displayName":"example_environment","envType":"Conda","isCondaEnvWithoutPython":true} debug 15:33:54.267: Get Jupyter Kernel Paths, Class name = Dp, completed in 1ms, has a truthy return value, Arg 1: "", Return Value: debug 15:33:54.268: Get KernelSpec root path, Class name = Dp, completed in 2ms, has a truthy return value, Arg 1: {"a":false,"b":null}, Return Value: , debug 15:33:54.268: Searching for kernel specs in interpreter C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE in path c:\conda_envs\example_environment\share\jupyter\kernels debug 15:33:54.268: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.268: loadData after detecting changes to interpreters debug 15:33:54.268: Updating cache with Python kernels , Added = , Updated = , Removed = debug 15:33:54.268: refreshData after detecting changes to interpreters debug 15:33:54.268: Listing kernels for 6 interpreters (C:\PYTHON\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE, C:\CONDA_ENVS\R2\PYTHON.EXE, C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE, C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE) debug 15:33:54.268: Listing Python & non-Python kernels for Interpreter c:\Python\python.exe debug 15:33:54.268: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 15:33:54.268: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 15:33:54.268: Listing Python & non-Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 15:33:54.268: Listing Python & non-Python kernels for Interpreter c:\conda_envs\example_environment\python.exe debug 15:33:54.268: Listing Python & non-Python kernels for Interpreter c:\conda_envs\id_scan\python.exe debug 15:33:54.268: Finding kernel specs for C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE interpreters: id_scan => file:///c%3A/conda_envs/id_scan/python.exe debug 15:33:54.269: Python environment for C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE is C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE from Python Extension API is {"internal":{"path":"C:\\conda_envs\\id_scan\\python.exe","id":"C:\\CONDA_ENVS\\ID_SCAN\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/conda_envs/id_scan/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\conda_envs\\id_scan"},"environment":{"type":"Conda","name":"id_scan","folderUri":{"$mid":1,"path":"/C:/conda_envs/id_scan","scheme":"file"}},"version":{"major":3,"minor":10,"micro":9,"release":{"level":"final","serial":0},"sysVersion":"3.10.9 | packaged by Anaconda, Inc. | (main, Mar 1 2023, 18:18:15) [MSC v.1916 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\CONDA_ENVS\\ID_SCAN\\PYTHON.EXE"} and original env is {"internal":{"path":"C:\\conda_envs\\id_scan\\python.exe","id":"C:\\CONDA_ENVS\\ID_SCAN\\PYTHON.EXE","executable":{"uri":{"$mid":1,"path":"/C:/conda_envs/id_scan/python.exe","scheme":"file"},"bitness":"64-bit","sysPrefix":"C:\\conda_envs\\id_scan"},"environment":{"type":"Conda","name":"id_scan","folderUri":{"$mid":1,"path":"/C:/conda_envs/id_scan","scheme":"file"}},"version":{"major":3,"minor":10,"micro":9,"release":{"level":"final","serial":0},"sysVersion":"3.10.9 | packaged by Anaconda, Inc. | (main, Mar 1 2023, 18:18:15) [MSC v.1916 64 bit (AMD64)]"},"tools":["Conda"]},"id":"C:\\CONDA_ENVS\\ID_SCAN\\PYTHON.EXE"} and translated is {"id":"C:\\CONDA_ENVS\\ID_SCAN\\PYTHON.EXE","sysPrefix":"C:\\conda_envs\\id_scan","envPath":{"$mid":1,"path":"/C:/conda_envs/id_scan","scheme":"file"},"displayPath":{"$mid":1,"path":"/C:/conda_envs/id_scan","scheme":"file"},"envName":"id_scan","uri":{"$mid":1,"fsPath":"c:\\conda_envs\\id_scan\\python.exe","_sep":1,"external":"file:///c%3A/conda_envs/id_scan/python.exe","path":"/C:/conda_envs/id_scan/python.exe","scheme":"file"},"displayName":"id_scan","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":10,"patch":9,"raw":"3.10.9 | packaged by Anaconda, Inc. | (main, Mar 1 2023, 18:18:15) [MSC v.1916 64 bit (AMD64)]"}} debug 15:33:54.270: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.270: loadData after detecting changes to interpreters debug 15:33:54.270: Updating cache with Python kernels , Added = , Updated = , Removed = debug 15:33:54.270: refreshData after detecting changes to interpreters debug 15:33:54.270: Listing kernels for 6 interpreters (C:\PYTHON\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE, C:\CONDA_ENVS\R2\PYTHON.EXE, C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE, C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE) debug 15:33:54.270: Listing Python & non-Python kernels for Interpreter c:\Python\python.exe debug 15:33:54.270: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\python.exe debug 15:33:54.270: Listing Python & non-Python kernels for Interpreter c:\ProgramData\Miniconda3\envs\r\python.exe debug 15:33:54.270: Listing Python & non-Python kernels for Interpreter c:\conda_envs\r2\python.exe debug 15:33:54.270: Listing Python & non-Python kernels for Interpreter c:\conda_envs\example_environment\python.exe debug 15:33:54.270: Listing Python & non-Python kernels for Interpreter c:\conda_envs\id_scan\python.exe debug 15:33:54.271: Get Jupyter Kernel Paths, Class name = Dp, completed in 2ms, has a truthy return value, Arg 1: "", Return Value: debug 15:33:54.271: Full interpreter list is length: 6, C:\PYTHON\PYTHON.EXE::Unknown:c:\Python\python.exe, C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE:base:Conda:c:\ProgramData\Miniconda3\python.exe, C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE:r:Conda:c:\ProgramData\Miniconda3\envs\r\python.exe, C:\CONDA_ENVS\R2\PYTHON.EXE:r2:Conda:c:\conda_envs\r2\python.exe, C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE:example_environment:Conda:c:\conda_envs\example_environment\python.exe, C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE:id_scan:Conda:c:\conda_envs\id_scan\python.exe debug 15:33:54.272: Get KernelSpec root path, Class name = Dp, completed in 3ms, has a truthy return value, Arg 1: {"a":false,"b":null}, Return Value: , debug 15:33:54.272: Searching for kernel specs in interpreter C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE in path c:\conda_envs\id_scan\share\jupyter\kernels debug 15:33:54.274: Not Searching for kernels as path does not exist, c:\conda_envs\r2\share\jupyter\kernels debug 15:33:54.274: Kernel Specs found in interpreter C:\CONDA_ENVS\R2\PYTHON.EXE are [] debug 15:33:54.274: Finding kernel specs for interpreter c:\conda_envs\r2\python.exe unique results: debug 15:33:54.274: Not Searching for kernels as path does not exist, c:\conda_envs\example_environment\share\jupyter\kernels debug 15:33:54.274: Kernel Specs found in interpreter C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE are [] debug 15:33:54.274: Finding kernel specs for interpreter c:\conda_envs\example_environment\python.exe unique results: debug 15:33:54.275: Not Searching for kernels as path does not exist, c:\conda_envs\id_scan\share\jupyter\kernels debug 15:33:54.275: Kernel Specs found in interpreter C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE are [] debug 15:33:54.275: Finding kernel specs for interpreter c:\conda_envs\id_scan\python.exe unique results: debug 15:33:54.282: Kernel for interpreter C:\CONDA_ENVS\R2\PYTHON.EXE is .jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher debug 15:33:54.282: Kernels for interpreter C:\CONDA_ENVS\R2\PYTHON.EXE are .jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher debug 15:33:54.282: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.282: Found 3 cached controllers debug 15:33:54.282: Creating 3 controllers debug 15:33:54.283: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher') with name 'r2 (Python 3.10.6)' debug 15:33:54.283: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher') with name 'r2 (Python 3.10.6)' debug 15:33:54.283: Updating cache with Python kernels startUsingPythonInterpreter:'.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\R2\PYTHON.EXE)' , Added = startUsingPythonInterpreter:'.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\R2\PYTHON.EXE)' , Updated = , Removed = debug 15:33:54.285: Kernel for interpreter C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE is .jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher debug 15:33:54.285: Kernels for interpreter C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE are .jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher debug 15:33:54.285: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.285: Found 4 cached controllers debug 15:33:54.285: Creating 4 controllers debug 15:33:54.285: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher') with name 'example_environment' debug 15:33:54.286: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher') with name 'example_environment' debug 15:33:54.286: Updating cache with Python kernels startUsingPythonInterpreter:'.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\R2\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE)' , Added = startUsingPythonInterpreter:'.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE)' , Updated = , Removed = debug 15:33:54.288: Kernel for interpreter C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE is .jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher debug 15:33:54.288: Kernels for interpreter C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE are .jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher debug 15:33:54.288: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', Added = , Updated = , Removed = debug 15:33:54.288: Found 5 cached controllers debug 15:33:54.288: Creating 5 controllers debug 15:33:54.288: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher') with name 'id_scan (Python 3.10.9)' debug 15:33:54.289: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher') with name 'id_scan (Python 3.10.9)' debug 15:33:54.289: Updating cache with Python kernels startUsingPythonInterpreter:'.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\R2\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE)' , Added = startUsingPythonInterpreter:'.jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE)' , Updated = , Removed = debug 15:33:54.308: Loading kernelspec from c:\Python\share\jupyter\kernels\python3\kernel.json for c:\Python\python.exe debug 15:33:54.308: Loading kernelspec from c:\ProgramData\Miniconda3\share\jupyter\kernels\ir\kernel.json for c:\ProgramData\Miniconda3\python.exe debug 15:33:54.308: Loading kernelspec from c:\ProgramData\Miniconda3\share\jupyter\kernels\python3\kernel.json for c:\ProgramData\Miniconda3\python.exe debug 15:33:54.308: Loading kernelspec from c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels\ir\kernel.json for c:\ProgramData\Miniconda3\envs\r\python.exe debug 15:33:54.309: Loading kernelspec from c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels\python3\kernel.json for c:\ProgramData\Miniconda3\envs\r\python.exe debug 15:33:54.319: Kernel Specs found in interpreter C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE are [{"specFile":"c:\\ProgramData\\Miniconda3\\envs\\r\\share\\jupyter\\kernels\\ir\\kernel.json","interpreterPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","isRegisteredByVSC":"registeredByNewVersionOfExtForCustomKernelSpec","name":"pythonjvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1","argv":["R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\ProgramData\\Miniconda3\\envs\\r\\share\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},{"specFile":"c:\\ProgramData\\Miniconda3\\envs\\r\\share\\jupyter\\kernels\\python3\\kernel.json","interpreterPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1","argv":["C:/ProgramData/Miniconda3/envs/r\\python.exe","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"C:/ProgramData/Miniconda3/envs/r\\python.exe","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"c:\\ProgramData\\Miniconda3\\envs\\r\\share\\jupyter\\kernels\\python3\\kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}] debug 15:33:54.319: Finding kernel specs for interpreter c:\ProgramData\Miniconda3\envs\r\python.exe unique results: c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels\ir\kernel.json c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels\python3\kernel.json debug 15:33:54.319: Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1', c:\ProgramData\Miniconda3\envs\r\python.exe for interpreter c:\ProgramData\Miniconda3\envs\r\python.exe and spec c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels\python3\kernel.json debug 15:33:54.319: Interpreter for Local kernel .jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} is C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE debug 15:33:54.319: Found kernel spec at end of discovery .jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} debug 15:33:54.319: Kernel for interpreter C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE is .jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher debug 15:33:54.319: Kernels for interpreter C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE are .jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file}, .jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher debug 15:33:54.319: Found 6 cached controllers debug 15:33:54.319: Creating 6 controllers debug 15:33:54.320: Creating notebook controller for startUsingLocalKernelSpec & view jupyter-notebook (id='.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R (r)' debug 15:33:54.320: Creating notebook controller for startUsingLocalKernelSpec & view interactive (id='.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R (r)' debug 15:33:54.320: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)', Added = startUsingLocalKernelSpec:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)', Updated = , Removed = debug 15:33:54.320: Found 7 cached controllers debug 15:33:54.320: Creating 7 controllers debug 15:33:54.321: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher') with name 'r (Python 3.10.6)' debug 15:33:54.321: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher') with name 'r (Python 3.10.6)' debug 15:33:54.321: Updating cache with Python kernels startUsingPythonInterpreter:'.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\R2\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)' , Added = startUsingPythonInterpreter:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)' , Updated = , Removed = debug 15:33:54.323: Kernel Specs found in interpreter C:\PYTHON\PYTHON.EXE are [{"specFile":"c:\\Python\\share\\jupyter\\kernels\\python3\\kernel.json","interpreterPath":"c:\\Python\\python.exe","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee","argv":["python","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"python","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"c:\\Python\\share\\jupyter\\kernels\\python3\\kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}] debug 15:33:54.323: Finding kernel specs for interpreter c:\Python\python.exe unique results: c:\Python\share\jupyter\kernels\python3\kernel.json debug 15:33:54.323: Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee', python for interpreter c:\Python\python.exe and spec c:\Python\share\jupyter\kernels\python3\kernel.json debug 15:33:54.323: Kernel for interpreter C:\PYTHON\PYTHON.EXE is .jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher debug 15:33:54.324: Kernels for interpreter C:\PYTHON\PYTHON.EXE are .jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher debug 15:33:54.324: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)', Added = , Updated = , Removed = debug 15:33:54.324: Found 8 cached controllers debug 15:33:54.324: Creating 8 controllers debug 15:33:54.324: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher') with name 'Python 3.11.0' debug 15:33:54.324: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher') with name 'Python 3.11.0' debug 15:33:54.324: Updating cache with Python kernels startUsingPythonInterpreter:'.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\R2\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher (interpreter id = C:\PYTHON\PYTHON.EXE)' , Added = startUsingPythonInterpreter:'.jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher (interpreter id = C:\PYTHON\PYTHON.EXE)' , Updated = , Removed = debug 15:33:54.327: Kernel Specs found in interpreter C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE are [{"specFile":"c:\\ProgramData\\Miniconda3\\share\\jupyter\\kernels\\ir\\kernel.json","interpreterPath":"c:\\ProgramData\\Miniconda3\\python.exe","isRegisteredByVSC":"registeredByNewVersionOfExtForCustomKernelSpec","name":"pythonjvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4","argv":["R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\ProgramData\\Miniconda3\\share\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},{"specFile":"c:\\ProgramData\\Miniconda3\\share\\jupyter\\kernels\\python3\\kernel.json","interpreterPath":"c:\\ProgramData\\Miniconda3\\python.exe","isRegisteredByVSC":"registeredByNewVersionOfExt","name":"pythonjvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4","argv":["C:/ProgramData/Miniconda3\\python.exe","-m","ipykernel_launcher","-f","{connection_file}"],"language":"python","executable":"C:/ProgramData/Miniconda3\\python.exe","display_name":"Python 3 (ipykernel)","metadata":{"debugger":true,"vscode":{"originalSpecFile":"c:\\ProgramData\\Miniconda3\\share\\jupyter\\kernels\\python3\\kernel.json","originalDisplayName":"Python 3 (ipykernel)"}}}] debug 15:33:54.327: Finding kernel specs for interpreter c:\ProgramData\Miniconda3\python.exe unique results: c:\ProgramData\Miniconda3\share\jupyter\kernels\ir\kernel.json c:\ProgramData\Miniconda3\share\jupyter\kernels\python3\kernel.json debug 15:33:54.327: Hiding default kernel spec 'Python 3 (ipykernel)', 'pythonjvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4', c:\ProgramData\Miniconda3\python.exe for interpreter c:\ProgramData\Miniconda3\python.exe and spec c:\ProgramData\Miniconda3\share\jupyter\kernels\python3\kernel.json debug 15:33:54.327: Interpreter for Local kernel .jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4#ir.c:\ProgramData\Miniconda3\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} is C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE debug 15:33:54.327: Found kernel spec at end of discovery .jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4#ir.c:\ProgramData\Miniconda3\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} debug 15:33:54.327: Kernel for interpreter C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE is .jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher debug 15:33:54.328: Kernels for interpreter C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE are .jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4#ir.c:\ProgramData\Miniconda3\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file}, .jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher debug 15:33:54.328: Found 9 cached controllers debug 15:33:54.328: Creating 9 controllers debug 15:33:54.328: Creating notebook controller for startUsingLocalKernelSpec & view jupyter-notebook (id='.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4#ir.c:\ProgramData\Miniconda3\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R (base)' debug 15:33:54.328: Creating notebook controller for startUsingLocalKernelSpec & view interactive (id='.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4#ir.c:\ProgramData\Miniconda3\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file}') with name 'R (base)' debug 15:33:54.328: Updating cache with Local kernels startUsingLocalKernelSpec:'.ir.c:\conda_envs\r2\lib\R\bin\x64\R.\.c:/conda_envs/r2/lib/r/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = undefined)', startUsingLocalKernelSpec:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)', startUsingLocalKernelSpec:'.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4#ir.c:\ProgramData\Miniconda3\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE)', Added = startUsingLocalKernelSpec:'.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4#ir.c:\ProgramData\Miniconda3\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} (interpreter id = C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE)', Updated = , Removed = debug 15:33:54.329: Found 10 cached controllers debug 15:33:54.329: Creating 10 controllers debug 15:33:54.329: Creating notebook controller for startUsingPythonInterpreter & view jupyter-notebook (id='.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher') with name 'base (Python 3.9.12)' debug 15:33:54.329: Creating notebook controller for startUsingPythonInterpreter & view interactive (id='.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher') with name 'base (Python 3.9.12)' debug 15:33:54.329: Updating cache with Python kernels startUsingPythonInterpreter:'.jvsc74a57bd0e198fd68b889a637e55dce082d5fbe9ef484cd5e5c537a4538600b8409a6a3a0.c:\conda_envs\r2\python.exe.c:\conda_envs\r2\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\R2\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0b784c9b4c5481e88e31c74025301df8be3d5fe5a932dc11f7ad5c4de9adb4a88.c:\conda_envs\example_environment\python.exe.c:\conda_envs\example_environment\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\EXAMPLE_ENVIRONMENT\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0de0d31678274965671c9714ec1a7df02db91fc70175c7195876a4d369129c780.c:\conda_envs\id_scan\python.exe.c:\conda_envs\id_scan\python.exe.-m#ipykernel_launcher (interpreter id = C:\CONDA_ENVS\ID_SCAN\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1.c:\ProgramData\Miniconda3\envs\r\python.exe.c:\ProgramData\Miniconda3\envs\r\python.exe.-m#ipykernel_launcher (interpreter id = C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd052634da84371cba311ea128a5ea7cdc41ff074b781779e754b270ff9f8153cee.c:\Python\python.exe.c:\Python\python.exe.-m#ipykernel_launcher (interpreter id = C:\PYTHON\PYTHON.EXE)', startUsingPythonInterpreter:'.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher (interpreter id = C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE)' , Added = startUsingPythonInterpreter:'.jvsc74a57bd019d1d53a962d236aa061289c2ac16dc8e6d9648c89fe79f459ae9a3493bc67b4.c:\ProgramData\Miniconda3\python.exe.c:\ProgramData\Miniconda3\python.exe.-m#ipykernel_launcher (interpreter id = C:\PROGRAMDATA\MINICONDA3\PYTHON.EXE)' , Updated = , Removed = debug 15:33:54.600: Get Active Interpreter, Class name = as (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb" debug 15:33:54.601: Get Active Interpreter, Class name = as, completed in 1ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 15:33:54.601: _jupyterPythonPathFunction: Giving Pylance "c:\Python\python.exe" as python path for "file:///c%3A/Users/Jonathan%20Graves/Desktop/Test/test.ipynb" debug 15:33:55.284: End refreshing Kernel Picker (1679438029651) debug 15:33:59.697: No controller, hence notebook communications cannot be initialized for editor c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:11.943: interpreterPackages getPackageInformation, Class name = Kd (started execution), Arg 1: {"interpreter":{"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r","envPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"displayPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"envName":"r","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","_sep":1,"external":"file:///c%3A/ProgramData/Miniconda3/envs/r/python.exe","path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"displayName":"r","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}}} debug 15:34:11.943: Create activated Env, Class name = du (started execution), Arg 1: {"interpreter":{"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r","envPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"displayPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"envName":"r","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","_sep":1,"external":"file:///c%3A/ProgramData/Miniconda3/envs/r/python.exe","path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"displayName":"r","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}}} debug 15:34:11.943: Getting activated env variables, Class name = hc (started execution), Arg 1: undefined, Arg 2: debug 15:34:11.943: Getting activated env variables impl, Class name = hc (started execution), Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:34:11.943: Getting activated env variables from Python, Class name = hc (started execution), Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:34:11.943: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: undefined, Arg 2: "RunPythonCode" debug 15:34:11.945: Get Custom Env Variables, Class name = Vl, completed in 2ms, has a truthy return value, Arg 1: undefined, Arg 2: "RunPythonCode" debug 15:34:11.968: Get Active Interpreter, Class name = as (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb" debug 15:34:11.969: Get Active Interpreter, Class name = as, completed in 1ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Return Value: {"id":"C:\\PYTHON\\PYTHON.EXE","sysPrefix":"C:\\Python","displayPath":{"$mid":1,"path":"/C:/Python/python.exe","scheme":"file"},"envName":"","uri":{"$mid":1,"fsPath":"c:\\Python\\python.exe","_sep":1,"path":"/C:/Python/python.exe","scheme":"file"},"displayName":"","envType":"Unknown","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":11,"patch":0,"raw":"3.11.0 (main, Oct 24 2022, 18:26:48) [MSC v.1933 64 bit (AMD64)]"}} debug 15:34:11.969: _jupyterPythonPathFunction: Giving Pylance "c:\Python\python.exe" as python path for "file:///c%3A/Users/Jonathan%20Graves/Desktop/Test/test.ipynb" debug 15:34:11.970: KernelProvider switched kernel to id = .jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\ProgramData\Miniconda3\envs\r\python.exe.\.r#--slave#-e#irkernel::main()#--args#{connection_file} debug 15:34:11.995: Initialize notebook communications for editor c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:11.995: Resolving notebook UI Comms (resolve) for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:11.996: initialize CommonMessageCoordinator debug 15:34:12.009: Registering commtarget jupyter.widget debug 15:34:12.009: IPyWidgetMessageDispatcher.initialize debug 15:34:12.010: Attempting to determine version of IPyWidgets debug 15:34:12.011: Controller selection change completed debug 15:34:12.011: Waiting for IPyWidgets version promise debug 15:34:12.011: Version of IPyWidgets 7 determined after 0.001s debug 15:34:12.012: Storing Preferred remote kernel for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb is undefined debug 15:34:12.615: IPyWidgetMessageDispatcher.initialize debug 15:34:12.615: Web view is ready to receive widget messages debug 15:34:14.392: Got env vars with python c:\ProgramData\Miniconda3\envs\r\python.exe, with env var count 68 in 2449ms. PATH value is C:\ProgramData\Miniconda3\envs\r;C:\ProgramData\Miniconda3\envs\r\Library\mingw-w64\bin;C:\ProgramData\Miniconda3\envs\r\Library\usr\bin;C:\ProgramData\Miniconda3\envs\r\Library\bin;C:\ProgramData\Miniconda3\envs\r\Scripts;C:\ProgramData\Miniconda3\envs\r\bin;C:\ProgramData\Miniconda3\condabin;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts;C:\Python;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0;C:\WINDOWS\System32\OpenSSH;C:\Program Files\Git\cmd;C:\Program Files\nodejs;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2;.;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin and Path value is undefined debug 15:34:14.392: Prepend PATH with python bin for C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE, PATH value is C:\ProgramData\Miniconda3\envs\r;C:\ProgramData\Miniconda3\envs\r\Library\mingw-w64\bin;C:\ProgramData\Miniconda3\envs\r\Library\usr\bin;C:\ProgramData\Miniconda3\envs\r\Library\bin;C:\ProgramData\Miniconda3\envs\r\Scripts;C:\ProgramData\Miniconda3\envs\r\bin;C:\ProgramData\Miniconda3\condabin;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts;C:\Python;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0;C:\WINDOWS\System32\OpenSSH;C:\Program Files\Git\cmd;C:\Program Files\nodejs;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2;.;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin and Path value is undefined debug 15:34:14.392: Activated Env Variables for C:\PROGRAMDATA\MINICONDA3\ENVS\R\PYTHON.EXE, PATH value is c:\ProgramData\Miniconda3\envs\r;C:\ProgramData\Miniconda3\envs\r;C:\ProgramData\Miniconda3\envs\r\Library\mingw-w64\bin;C:\ProgramData\Miniconda3\envs\r\Library\usr\bin;C:\ProgramData\Miniconda3\envs\r\Library\bin;C:\ProgramData\Miniconda3\envs\r\Scripts;C:\ProgramData\Miniconda3\envs\r\bin;C:\ProgramData\Miniconda3\condabin;C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts;C:\Python;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0;C:\WINDOWS\System32\OpenSSH;C:\Program Files\Git\cmd;C:\Program Files\nodejs;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2;.;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin and Path value is undefined debug 15:34:14.392: Getting activated env variables from Python, Class name = hc, completed in 2449ms, has a truthy return value, Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:34:14.392: Got env vars with python c:\ProgramData\Miniconda3\envs\r\python.exe in 2449ms with 68 variables debug 15:34:14.392: Getting activated env variables impl, Class name = hc, completed in 2449ms, has a truthy return value, Arg 1: undefined, Arg 2: , Arg 3: undefined debug 15:34:14.392: Getting activated env variables, Class name = hc, completed in 2449ms, has a truthy return value, Arg 1: undefined, Arg 2: debug 15:34:14.393: Create activated Env, Class name = du, completed in 2450ms, has a truthy return value, Arg 1: {"interpreter":{"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r","envPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"displayPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"envName":"r","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","_sep":1,"external":"file:///c%3A/ProgramData/Miniconda3/envs/r/python.exe","path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"displayName":"r","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}}} info 15:34:14.397: Process Execution: > c:\ProgramData\Miniconda3\envs\r\python.exe -m pip list > c:\ProgramData\Miniconda3\envs\r\python.exe -m pip list debug 15:34:15.408: interpreterPackages getPackageInformation, Class name = Kd, completed in 3465ms, has a falsy return value, Arg 1: {"interpreter":{"id":"C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE","sysPrefix":"C:\\ProgramData\\Miniconda3\\envs\\r","envPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"displayPath":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r","_sep":1,"path":"/C:/ProgramData/Miniconda3/envs/r","scheme":"file"},"envName":"r","uri":{"$mid":1,"fsPath":"c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe","_sep":1,"external":"file:///c%3A/ProgramData/Miniconda3/envs/r/python.exe","path":"/C:/ProgramData/Miniconda3/envs/r/python.exe","scheme":"file"},"displayName":"r","envType":"Conda","isCondaEnvWithoutPython":false,"version":{"major":3,"minor":10,"patch":6,"raw":"3.10.6 | packaged by conda-forge | (main, Aug 22 2022, 20:29:51) [MSC v.1929 64 bit (AMD64)]"}}} debug 15:34:17.999: VSCodeNotebookController::handleExecution, Class name = db (started execution) debug 15:34:18.000: Execute Cell 0 c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:18.001: start the kernel, options.disableUI=false for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb error 15:34:18.002: Error in execution [ab [Error]: The kernel 'R (r)' was not started as it is located in an insecure location 'c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels\ir\kernel.json'. Click [here](https://aka.ms/JupyterTrustedKernelPaths) for further details, optionally update the setting [jupyter.kernels.trusted](command:workbench.action.openSettings?["jupyter.kernels.trusted"]) to trust the kernel. at cb.canStartKernel (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:152930) at cb.wrapKernelMethodImpl (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:153129) at cb.wrapKernelMethod (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:151827) at cb.connectToNotebookKernel (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:154054) at db.connectToKernel (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:162013) at db.executeCell (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:161460) at c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:158399 at Array.map () at db.handleExecution (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:158386)] { category: 'unknown', originalException: undefined, kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\ProgramData\\Miniconda3\\envs\\r\\share\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: 'c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe', isRegisteredByVSC: 'registeredByNewVersionOfExtForCustomKernelSpec', name: 'pythonjvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1', argv: [Array], language: 'R', executable: 'R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: { id: 'C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE', sysPrefix: 'C:\\ProgramData\\Miniconda3\\envs\\r', envPath: [E], displayPath: [E], envName: 'r', uri: [E], displayName: 'r', envType: 'Conda', isCondaEnvWithoutPython: false, version: [Object] }, id: '.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe.\\.r#--slave#-e#irkernel::main()#--args#{connection_file}' } } debug 15:34:18.005: Start cell 0 execution @ undefined error 15:34:18.005: Error in execution (get message for cell) [ab [Error]: The kernel 'R (r)' was not started as it is located in an insecure location 'c:\ProgramData\Miniconda3\envs\r\share\jupyter\kernels\ir\kernel.json'. Click [here](https://aka.ms/JupyterTrustedKernelPaths) for further details, optionally update the setting [jupyter.kernels.trusted](command:workbench.action.openSettings?["jupyter.kernels.trusted"]) to trust the kernel. at cb.canStartKernel (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:152930) at cb.wrapKernelMethodImpl (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:153129) at cb.wrapKernelMethod (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:151827) at cb.connectToNotebookKernel (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:154054) at db.connectToKernel (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:162013) at db.executeCell (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:161460) at c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:158399 at Array.map () at db.handleExecution (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:24:158386)] { category: 'unknown', originalException: undefined, kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: cs { specFile: 'c:\\ProgramData\\Miniconda3\\envs\\r\\share\\jupyter\\kernels\\ir\\kernel.json', interpreterPath: 'c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe', isRegisteredByVSC: 'registeredByNewVersionOfExtForCustomKernelSpec', name: 'pythonjvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1', argv: [Array], language: 'R', executable: 'R', display_name: 'R', metadata: [Object], env: undefined, interrupt_mode: undefined }, interpreter: { id: 'C:\\PROGRAMDATA\\MINICONDA3\\ENVS\\R\\PYTHON.EXE', sysPrefix: 'C:\\ProgramData\\Miniconda3\\envs\\r', envPath: [E], displayPath: [E], envName: 'r', uri: [E], displayName: 'r', envType: 'Conda', isCondaEnvWithoutPython: false, version: [Object] }, id: '.jvsc74a57bd0173f1425ad9aa1d696697b08670c845483a368590f5b163800f8c98c915fe0e1#ir.c:\\ProgramData\\Miniconda3\\envs\\r\\python.exe.\\.r#--slave#-e#irkernel::main()#--args#{connection_file}' } } debug 15:34:18.032: End cell 0 execution @ undefined, started @ undefined, elapsed time = 0s debug 15:34:18.032: VSCodeNotebookController::handleExecution, Class name = db, completed in 33ms, has a falsy return value info 15:34:37.406: Dispose Kernel 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' associated with 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 15:34:37.407: Kernel got disposed, hence there is no longer a kernel associated with c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:37.408: KernelProvider switched kernel to id = .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} debug 15:34:37.408: start the kernel, options.disableUI=true for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:37.409: Start Jupyter Session in kernel.ts with disableUI = true debug 15:34:37.410: Initialize notebook communications for editor c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:37.410: Resolving notebook UI Comms (resolve) for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:37.410: initialize CommonMessageCoordinator debug 15:34:37.410: Registering commtarget jupyter.widget debug 15:34:37.410: IPyWidgetMessageDispatcher.initialize debug 15:34:37.411: Attempting to determine version of IPyWidgets debug 15:34:37.411: Controller selection change completed debug 15:34:37.412: Waiting for IPyWidgets version promise info 15:34:37.413: Starting Jupyter Session startUsingLocalKernelSpec, .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' (disableUI=true) debug 15:34:37.413: Creating raw notebook for resource 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 15:34:37.413: Computing working directory for resource 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 15:34:37.414: Version of IPyWidgets 7 determined after 0.003s debug 15:34:37.414: Storing Preferred remote kernel for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb is undefined debug 15:34:37.415: Storing Preferred remote kernel for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb is undefined debug 15:34:37.417: Kernel Launcher. launch, Class name = ah (started execution), Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 4: "~\\Desktop\\Test", Arg 5: {"a":false,"b":null} debug 15:34:37.462: Launching kernel in kernelProcess.ts, Class name = th (started execution), Arg 1: "~\\Desktop\\Test", Arg 2: "" info 15:34:37.462: Launching Raw Kernel R # C:/PROGRA~1/R/R-42~1.1/bin/x64/R debug 15:34:37.462: Create ProcessService, Class name = kl (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: debug 15:34:37.462: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: "RunNonPythonCode", Arg 3: debug 15:34:37.462: Cached data exists getEnvironmentVariables, c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:37.463: Get Custom Env Variables, Class name = Vl, completed in 1ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: "RunNonPythonCode", Arg 3: debug 15:34:37.463: Create ProcessService, Class name = kl, completed in 1ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: debug 15:34:37.463: No custom variables nor do we have a conda environment debug 15:34:37.464: Kernel Env Variables for c:\Users\Jonathan Graves\AppData\Roaming\jupyter\kernels\ir\kernel.json, PATH value is C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin info 15:34:37.469: Process Execution: > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json" > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json" info 15:34:37.469: Process Execution: cwd: ~\Desktop\Test cwd: ~\Desktop\Test debug 15:34:37.469: Launching kernel in kernelProcess.ts, Class name = th, completed in 7ms, has a truthy return value, Arg 1: "~\\Desktop\\Test", Arg 2: "" debug 15:34:37.474: Version of IPyWidgets 7 determined after 0.001s debug 15:34:38.146: KernelProcess error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted warn 15:34:38.146: StdErr from Kernel Process Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted debug 15:34:38.164: KernelProcess Exit Exit - 1 Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted error 15:34:38.164: Disposing kernel process due to an error [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 15:34:38.165: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted info 15:34:38.165: Dispose Kernel process 10440. debug 15:34:38.166: Disposed Kernel process 10440. error 15:34:38.167: Kernel Launcher. launch, Class name = ah, completed in 750ms, has a falsy return value, Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 4: "~\\Desktop\\Test", Arg 5: [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 15:34:38.167: Failed to connect raw kernel session: Error: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. debug 15:34:38.167: Shutdown session -- complete debug 15:34:38.167: failed to create IJupyterKernelConnectionSession in kernel, UI Disabled = true [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument\r\n` + 'Execution halted\r\n' } warn 15:34:38.168: Error occurred while trying to start the kernel, options.disableUI=true [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172Pj8vN393HTRD.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 15:34:38.178: IPyWidgetMessageDispatcher.initialize debug 15:34:38.178: Web view is ready to receive widget messages debug 15:34:41.470: VSCodeNotebookController::handleExecution, Class name = db (started execution) debug 15:34:41.471: Execute Cell 0 c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:41.471: start the kernel, options.disableUI=false for c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:41.471: Start Jupyter Session in kernel.ts with disableUI = false info 15:34:41.472: Starting Jupyter Session startUsingLocalKernelSpec, .ir.c:\PROGRA~1\R\R-42~1.1\bin\x64\R.\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file} for 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' (disableUI=false) debug 15:34:41.473: Creating raw notebook for resource 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 15:34:41.473: Computing working directory for resource 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 15:34:41.475: Kernel Launcher. launch, Class name = ah (started execution), Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 4: "~\\Desktop\\Test", Arg 5: {"a":false,"b":null} debug 15:34:41.537: Launching kernel in kernelProcess.ts, Class name = th (started execution), Arg 1: "~\\Desktop\\Test", Arg 2: "" info 15:34:41.537: Launching Raw Kernel R # C:/PROGRA~1/R/R-42~1.1/bin/x64/R debug 15:34:41.537: Create ProcessService, Class name = kl (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: debug 15:34:41.537: Get Custom Env Variables, Class name = Vl (started execution), Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: "RunNonPythonCode", Arg 3: debug 15:34:41.537: Cached data exists getEnvironmentVariables, c:\Users\Jonathan Graves\Desktop\Test\test.ipynb debug 15:34:41.537: Get Custom Env Variables, Class name = Vl, completed in 0ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: "RunNonPythonCode", Arg 3: debug 15:34:41.537: Create ProcessService, Class name = kl, completed in 0ms, has a truthy return value, Arg 1: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 2: debug 15:34:41.537: No custom variables nor do we have a conda environment debug 15:34:41.538: Kernel Env Variables for c:\Users\Jonathan Graves\AppData\Roaming\jupyter\kernels\ir\kernel.json, PATH value is C:\Program Files\Amazon Corretto\jdk17.0.6_10\bin;C:\Program Files\Amazon Corretto\jdk1.8.0_362\bin;C:\Program Files\Amazon Corretto\jre8\bin;C:\Python\Scripts\;C:\Python\;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDOWS\System32\WindowsPowerShell\v1.0\;C:\WINDOWS\System32\OpenSSH\;C:\Program Files\Git\cmd;C:\Program Files\nodejs\;C:\ProgramData\chocolatey\bin;C:\Program Files\Calibre2\;;C:\Program Files\Docker\Docker\resources\bin;C:\Program Files (x86)\Bitvise SSH Client;C:\Users\Jonathan Graves\AppData\Local\Programs\Quarto\bin;C:\Users\Jonathan Graves\AppData\Local\Microsoft\WindowsApps;C:\Program Files\R\R-4.2.1\bin;C:\Users\Jonathan Graves\AppData\Local\GitHubDesktop\bin;C:\Users\Jonathan Graves\AppData\Roaming\npm;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\pympress\;C:\Users\Jonathan Graves\AppData\Local\Programs\Python\Python310\Scripts;C:\ProgramData\Miniconda3\Scripts;C:\texlive\2022\bin\win32;C:\Users\Jonathan Graves\AppData\Local\gitkraken\bin;C:\Users\Jonathan Graves\AppData\Local\Programs\Microsoft VS Code Insiders\bin info 15:34:41.542: Process Execution: > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json" > C:/PROGRA~1/R/R-42~1.1/bin/x64/R --slave -e IRkernel::main() --args "~\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json" info 15:34:41.542: Process Execution: cwd: ~\Desktop\Test cwd: ~\Desktop\Test debug 15:34:41.542: Launching kernel in kernelProcess.ts, Class name = th, completed in 5ms, has a truthy return value, Arg 1: "~\\Desktop\\Test", Arg 2: "" debug 15:34:42.224: KernelProcess error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted warn 15:34:42.224: StdErr from Kernel Process Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted debug 15:34:42.244: KernelProcess Exit Exit - 1 Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted error 15:34:42.245: Disposing kernel process due to an error [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 15:34:42.245: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted info 15:34:42.245: Dispose Kernel process 19400. debug 15:34:42.246: Disposed Kernel process 19400. error 15:34:42.247: Kernel Launcher. launch, Class name = ah, completed in 771ms, has a falsy return value, Arg 1: {"id":".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}","kernelSpec":{"specFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","name":"ir","argv":["C:/PROGRA~1/R/R-42~1.1/bin/x64/R","--slave","-e","IRkernel::main()","--args","{connection_file}"],"language":"R","executable":"C:/PROGRA~1/R/R-42~1.1/bin/x64/R","display_name":"R","metadata":{"vscode":{"originalSpecFile":"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json","originalDisplayName":"R"}}},"kind":"startUsingLocalKernelSpec"}, Arg 2: 60000, Arg 3: "/c:/Users/Jonathan Graves/Desktop/Test/test.ipynb", Arg 4: "~\\Desktop\\Test", Arg 5: [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument\r\n` + 'Execution halted\r\n' } error 15:34:42.247: Failed to connect raw kernel session: Error: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. debug 15:34:42.247: Shutdown session -- complete warn 15:34:42.248: Error occurred while trying to start the kernel, options.disableUI=false [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument\r\n` + 'Execution halted\r\n' } warn 15:34:42.248: Kernel Error, context = start [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 15:34:42.249: Are Dependencies Installed, Class name = dp, completed in 1ms, has a truthy return value, Arg 1: ".ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}", Arg 2: undefined, Arg 3: true, Return Value: true info 15:34:42.251: Dispose Kernel 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' associated with 'c:\Users\Jonathan Graves\Desktop\Test\test.ipynb' debug 15:34:42.251: Kernel got disposed, hence there is no longer a kernel associated with c:\Users\Jonathan Graves\Desktop\Test\test.ipynb error 15:34:42.253: Error in execution [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 15:34:42.253: Start cell 0 execution @ undefined error 15:34:42.253: Error in execution (get message for cell) [zp [Error]: The kernel died. Error: Error in open.connection(con, "rb") : cannot open the connection Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection In addition: Warning message: In open.connection(con, "rb") : cannot open file '"c:\Users\Jonathan Graves\AppData\Roaming\jupyter\runtime\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument Execution halted... View Jupyter [log](command:jupyter.viewOutput) for further details. at ChildProcess. (c:\Users\Jonathan Graves\.vscode-insiders\extensions\ms-toolsai.jupyter-2023.3.1000820547\out\extension.node.js:17:58325) at ChildProcess.emit (node:events:538:35) at ChildProcess._handle.onexit (node:internal/child_process:291:12)] { category: 'kerneldied', kernelConnectionMetadata: ca { kind: 'startUsingLocalKernelSpec', kernelSpec: { specFile: 'c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\kernels\\ir\\kernel.json', name: 'ir', argv: [Array], language: 'R', executable: 'C:/PROGRA~1/R/R-42~1.1/bin/x64/R', display_name: 'R', metadata: [Object] }, interpreter: undefined, id: '.ir.c:\\PROGRA~1\\R\\R-42~1.1\\bin\\x64\\R.\\.c:/progra~1/r/r-42~1.1/bin/x64/r#--slave#-e#irkernel::main()#--args#{connection_file}' }, exitCode: 1, stdErr: 'Error in open.connection(con, "rb") : cannot open the connection\r\n' + 'Calls: ... parse_and_simplify -> parseJSON -> parse_con -> open -> open.connection\r\n' + 'In addition: Warning message:\r\n' + 'In open.connection(con, "rb") :\r\n' + ` cannot open file '"c:\\Users\\Jonathan Graves\\AppData\\Roaming\\jupyter\\runtime\\kernel-v2-5172a68ObbQdBZoj.json"': Invalid argument\r\n` + 'Execution halted\r\n' } debug 15:34:42.275: End cell 0 execution @ undefined, started @ undefined, elapsed time = 0s debug 15:34:42.276: VSCodeNotebookController::handleExecution, Class name = db, completed in 806ms, has a falsy return value ```
DonJayamanne commented 1 year ago

ms-toolsai-jupyter-insiders.vsix.zip

@jlgraves-ubc @masharifi01 Please could you try the above VSIX

I'm sorry this has not yet been resolved, and thank you for your patience

jlgraves-ubc commented 1 year ago

🎉🎉🥳IT WORKS🥳🎉🎉

Thank you so much! Your help is very much appreciated.

DonJayamanne commented 1 year ago

Thanks for getting back, Unfortunately this we are in the last stages of the release, hence this fix will make its way into the release next time (which would be in around a month) However the fix will be in next weeks pre-release version

masharifi01 commented 1 year ago

It works now Thank you for taking the time and effort to solve this issue for us. I really appreciate your help.