Open amirhosseindavoody opened 9 months ago
DonJayamanne
commented
9 months ago Thanks for filing this issue and sorry you are running into this. Please can you let me know whats wrong with the latest versions, given the latest version is where we fix bugs I'd like you to try the latest version and let me know how that goes. (you will need to update your version of vscode as well).
amirhosseindavoody
commented
9 months ago This is the issue with the latest VScode version 1.86. It is incompatible with the version of linux we are running in our server. So, I had to revert back to 1.85.2.
Following up the VScode release the python extension also created another release that is incompatible with 1.85.2. So, I had to revert back that release as well.
As for the jupyter notebook extension, after checking I realized that the latest release is from 3 weeks ago, so I have updated the extension version to v2023.11.1100101639 but still getting the same error. I updated the bug discription to reflect the jupyter notebook extension version.
DonJayamanne
commented
9 months ago Now, none of the functionalities for jupyter notebook work.
Failed to get activated conda env vars for /path/to/python/environment/.pixi/envs/default/bin/python in 3714ms
This seems to be due to an error from python extension not being able to activate your conda environment
Unfortunate lly I'll have to transfer this issue too the python extension brepo as the underlying issue is in that extension
before i do that I'd like to clarify what isn't working exactly Are you trying to run code against you're local python env? If you're connecting to remote environments, you might want to try and remove the existing items and add them again
Based on the logs pylance isn't installed or might be disabled. Please can you check
amirhosseindavoody
commented
9 months ago You are right. The problem was with the python extension not recognizing the correct environment.
The root cause was this:
I don't think it is an issue with python or jupyter extensions. It is a bad setup on my part which I wasn't able to figure out.
The answers to your question:
DonJayamanne
commented
9 months ago @amirhosseindavoody , to be clear, this is a regression, i.e. it used to work, but not anymore, Thanks @karrtikr /cc
Environment data
Expected behaviour
The jupyter notebook should autocomplete the variable names and show list of live variables.
Actual behaviour
None of the functionalities of jupyter notebook extensions for autocomplete and showing existing variables work.
Steps to reproduce:
[NOTE: Self-contained, minimal reproducing code samples are extremely helpful and will expedite addressing your issue]
I don't have exact instructions, but this happened when I had to revert back from vscode 1.86 release to 1.85.2 because of glibc version incompatibility on my remote machine. Then I found out that the extensions have been upgraded too. So, I reverted back the extensions to some previous version from back in November. The extensions I reverted are Jupyter notebook, pylance, and vscode-python. Now, none of the functionalities for jupyter notebook work. Python extension seems to work for now. I get autocomplete in
.pyfiles but nothing in.ipynbfiles.I see this error when I look at the jupyter extension page:
Logs
Output for
Jupyterin theOutputpanel (View→Output, change the drop-down the upper-right of theOutputpanel toJupyter)``` Visual Studio Code (1.85.2, ssh-remote, desktop) Jupyter Extension Version: 2023.11.1003402403. Python Extension Version: 2023.20.0. Pylance Extension Version: 2023.11.10. Platform: linux (x64). Multiple Workspace folders opened /path/to/python/environment, path/to/jupyter/notebook 10:28:04.576 [info] Start refreshing Kernel Picker (1707157684576) 10:28:04.582 [info] Not using Pylance 10:28:05.473 [error] Failed to validate Password info [D [FetchError]: request to http://remote-server-ip:8888/tree? failed, reason: connect ECONNREFUSED 10.116.83.98:8888 at ClientRequest. (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/node-fetch.js:1:306417)
at ClientRequest.emit (node:events:513:28)
at Socket.socketErrorListener (node:_http_client:502:9)
at Socket.emit (node:events:513:28)
at emitErrorNT (node:internal/streams/destroy:151:8)
at emitErrorCloseNT (node:internal/streams/destroy:116:3)
at process.processTicksAndRejections (node:internal/process/task_queues:82:21)] {
type: 'system',
errno: 'ECONNREFUSED',
code: 'ECONNREFUSED'
}
10:28:05.509 [error] Error fetching kernels from http://remote-server-ip:8888/ (remote-server-ip): [FetchError: request to http://remote-server-ip:8888/api/kernels?1707157685499 failed, reason: connect ECONNREFUSED 10.116.83.98:8888
at ClientRequest. (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/node-fetch.js:1:306417)
at ClientRequest.emit (node:events:513:28)
at Socket.socketErrorListener (node:_http_client:502:9)
at Socket.emit (node:events:513:28)
at emitErrorNT (node:internal/streams/destroy:151:8)
at emitErrorCloseNT (node:internal/streams/destroy:116:3)
at process.processTicksAndRejections (node:internal/process/task_queues:82:21)]
10:28:05.510 [error] UniversalRemoteKernelFinder: Failed to get kernels without cache [FetchError: request to http://remote-server-ip:8888/api/kernels?1707157685499 failed, reason: connect ECONNREFUSED 10.116.83.98:8888
at ClientRequest. (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/node-fetch.js:1:306417)
at ClientRequest.emit (node:events:513:28)
at Socket.socketErrorListener (node:_http_client:502:9)
at Socket.emit (node:events:513:28)
at emitErrorNT (node:internal/streams/destroy:151:8)
at emitErrorCloseNT (node:internal/streams/destroy:116:3)
at process.processTicksAndRejections (node:internal/process/task_queues:82:21)]
10:28:05.511 [error] Jupyter Lab Helper:getKernelSpecs failure: [Error: Poll (@jupyterlab/services:KernelSpecManager#specs) is disposed.
at v.dispose (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/@jupyterlab/services.js:11:10935)
at ni.dispose (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/@jupyterlab/services.js:11:29299)
at r.dispose (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/extension.node.js:138:4517)
at process.processTicksAndRejections (node:internal/process/task_queues:95:5)
at async Promise.all (index 0)
at async rT.listKernelsFromConnection (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/extension.node.js:235:22644)
at async /nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/extension.node.js:235:20130]
10:28:05.511 [error] Failed to validate Password info [D [FetchError]: request to http://remote-server-ip:8888/tree? failed, reason: connect ECONNREFUSED 10.148.216.186:8888
at ClientRequest. (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/node-fetch.js:1:306417)
at ClientRequest.emit (node:events:513:28)
at Socket.socketErrorListener (node:_http_client:502:9)
at Socket.emit (node:events:513:28)
at emitErrorNT (node:internal/streams/destroy:151:8)
at emitErrorCloseNT (node:internal/streams/destroy:116:3)
at process.processTicksAndRejections (node:internal/process/task_queues:82:21)] {
type: 'system',
errno: 'ECONNREFUSED',
code: 'ECONNREFUSED'
}
10:28:05.517 [error] Error fetching kernels from http://remote-server-ip:8888/ (remote-server-ip): [FetchError: request to http://remote-server-ip:8888/api/kernels?1707157685513 failed, reason: connect ECONNREFUSED 10.148.216.186:8888
at ClientRequest. (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/node-fetch.js:1:306417)
at ClientRequest.emit (node:events:513:28)
at Socket.socketErrorListener (node:_http_client:502:9)
at Socket.emit (node:events:513:28)
at emitErrorNT (node:internal/streams/destroy:151:8)
at emitErrorCloseNT (node:internal/streams/destroy:116:3)
at process.processTicksAndRejections (node:internal/process/task_queues:82:21)]
10:28:05.520 [error] UniversalRemoteKernelFinder: Failed to get kernels without cache [FetchError: request to http://remote-server-ip:8888/api/kernels?1707157685513 failed, reason: connect ECONNREFUSED 10.148.216.186:8888
at ClientRequest. (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/node-fetch.js:1:306417)
at ClientRequest.emit (node:events:513:28)
at Socket.socketErrorListener (node:_http_client:502:9)
at Socket.emit (node:events:513:28)
at emitErrorNT (node:internal/streams/destroy:151:8)
at emitErrorCloseNT (node:internal/streams/destroy:116:3)
at process.processTicksAndRejections (node:internal/process/task_queues:82:21)]
10:28:05.520 [error] Jupyter Lab Helper:getKernelSpecs failure: [Error: Poll (@jupyterlab/services:KernelSpecManager#specs) is disposed.
at v.dispose (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/@jupyterlab/services.js:11:10935)
at ni.dispose (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/node_modules/@jupyterlab/services.js:11:29299)
at r.dispose (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/extension.node.js:138:4517)
at process.processTicksAndRejections (node:internal/process/task_queues:95:5)
at async Promise.all (index 0)
at async rT.listKernelsFromConnection (/nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/extension.node.js:235:22644)
at async /nfs/site/disks/tadm_work_19/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/dist/extension.node.js:235:20130]
10:28:05.870 [info] Starting Kernel startUsingPythonInterpreter, .jvsc74a57bd0cd805199a84c55772db822326d76150fb29da8490063933ca6c923deab3cb765./path/to/python/environment/.pixi/envs/default/python./path/to/python/environment/.pixi/envs/default/python.-m#ipykernel_launcher (Python Path: /path/to/python/environment/.pixi/envs/default/bin/python, Conda, 3.9.18) for 'path/to/jupyter/notebook/data_cleanup.ipynb' (disableUI=true)
10:28:07.134 [info] End refreshing Kernel Picker (1707157684576)
10:28:09.582 [error] Failed to get activated conda env vars for /path/to/python/environment/.pixi/env/bin/python
in 4174ms
10:28:09.584 [error] Unable to determine site packages path for python /path/to/python/environment/.pixi/env/bin/python (Conda)
10:28:09.594 [info] Process Execution: /path/to/python/environment/.pixi/env/bin/python -m pip list
10:28:09.597 [error] Failed to get activated conda env vars for /path/to/python/environment/.pixi/envs/default/bin/python
in 3714ms
10:28:09.599 [error] Unable to determine site packages path for python /path/to/python/environment/.pixi/envs/default/bin/python (Conda)
10:28:09.606 [info] Process Execution: /path/to/python/environment/.pixi/envs/default/bin/python -c "import ipykernel; print(ipykernel.__version__); print("5dc3a68c-e34e-4080-9c3e-2a532b2ccb4d"); print(ipykernel.__file__)"
10:28:09.613 [info] Process Execution: /path/to/python/environment/.pixi/envs/default/bin/python -m ipykernel_launcher --f=~/.local/share/jupyter/runtime/kernel-v2-31540CcI3YXsmyhtA.json
> cwd: path/to/jupyter/notebook
10:28:09.619 [error] Failed to get activated conda env vars for /path/to/python/environment/.pixi/envs/default/bin/python
in 3750ms
10:28:09.620 [error] Unable to determine site packages path for python /path/to/python/environment/.pixi/envs/default/bin/python (Conda)
10:28:09.626 [info] Process Execution: /path/to/python/environment/.pixi/envs/default/bin/python -m pip list
10:28:09.638 [info] Process Execution: /path/to/python/environment/.pixi/env/bin/python -c "import pip;print('6af208d0-cb9c-427f-b937-ff563e17efdf')"
10:28:09.671 [info] Process Execution: /path/to/python/environment/.pixi/envs/default/bin/python -c "import pip;print('6af208d0-cb9c-427f-b937-ff563e17efdf')"
10:28:10.757 [info] Process Execution: /path/to/python/environment/.pixi/envs/default/bin/python ~/.vscode-server/extensions/ms-toolsai.jupyter-2023.11.1003402403-linux-x64/pythonFiles/printJupyterDataDir.py
12:07:28.187 [info] Handle Execution of Cells 0 for path/to/jupyter/notebook/data_cleanup.ipynb
12:07:28.196 [info] Kernel acknowledged execution of cell 0 @ 1707163648195
12:07:29.495 [info] End cell 0 execution after 1.299s, completed @ 1707163649494, started @ 1707163648195
12:07:31.237 [info] Handle Execution of Cells 1 for path/to/jupyter/notebook/data_cleanup.ipynb
12:07:31.244 [info] Kernel acknowledged execution of cell 1 @ 1707163651244
12:07:31.246 [info] End cell 1 execution after 0.002s, completed @ 1707163651246, started @ 1707163651244
12:07:42.969 [info] Handle Execution of Cells 3 for path/to/jupyter/notebook/data_cleanup.ipynb
12:07:42.975 [info] Kernel acknowledged execution of cell 3 @ 1707163662975
12:07:43.606 [info] End cell 3 execution after 0.631s, completed @ 1707163663606, started @ 1707163662975
12:07:44.424 [info] Handle Execution of Cells 4 for path/to/jupyter/notebook/data_cleanup.ipynb
12:07:44.430 [info] Kernel acknowledged execution of cell 4 @ 1707163664430
12:07:44.432 [info] End cell 4 execution after 0.002s, completed @ 1707163664432, started @ 1707163664430
12:07:53.921 [info] Handle Execution of Cells 6 for path/to/jupyter/notebook/data_cleanup.ipynb
12:07:53.931 [info] Kernel acknowledged execution of cell 6 @ 1707163673931
12:08:21.689 [info] End cell 6 execution after 27.758s, completed @ 1707163701689, started @ 1707163673931
12:19:06.354 [info] Start refreshing Interpreter Kernel Picker
12:19:06.354 [info] Start refreshing Kernel Picker (1707164346354)
12:19:10.275 [info] End refreshing Kernel Picker (1707164346354)
```