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microsud
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microbiomeutilities
The is mostly a wrapper tool using phyloseq and microbiome R packages.
https://microsud.github.io/microbiomeutilities/
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error with plot_taxa_heatmap
#188
gbergmann
opened
1 year ago
0
A
#187
cafferychen777
closed
1 year ago
8
Problem to load
#186
Sirbius
opened
1 year ago
1
Plot_spaghetti - same results each result-cell. Idea about why?
#185
mariamaseng
opened
1 year ago
0
Unable to change levels of group variable in plot_paired_abundances
#184
mariamaseng
opened
1 year ago
0
Taxonomic_Levels Percent_Classification
#183
apoosakkannu
closed
1 year ago
2
plot_taxa_boxplot error
#182
bsomervi
opened
1 year ago
2
double genus name in heatmap
#181
najibveto
closed
2 years ago
1
format_to_besthit edit
#180
sjhardisty
closed
2 years ago
1
plot_taxa_barplot -
#179
mariamaseng
closed
2 years ago
4
Error in `check_aesthetics()`: ! plot_ordination_utils
#178
imonteroo
closed
2 years ago
2
Problem to install
#177
Fuad59
closed
2 years ago
6
Taxonomic levels should be either 6 (untill genus) or 7 (until species) level
#176
tarunaaggarwal
closed
2 years ago
1
Relative abundance plot for selected taxa
#175
shigdel
closed
3 years ago
5
fix format_to_besthit
#174
microsud
closed
3 years ago
0
Phy_tree not included in the result of format_to_besthit
#173
tcrispino13
closed
3 years ago
2
rlang::last_error()
#172
JunqiangZheng
closed
3 years ago
3
Cannot install microbiomeutilities on R, what to do?
#171
tcrispino13
closed
3 years ago
6
Devel
#170
microsud
closed
3 years ago
0
Error with plot_taxa_cv()
#169
elaine-shen
closed
3 years ago
3
added peak-methods
#168
microsud
closed
3 years ago
0
Removed prevalence option `plot_taxa_heatmap`.
#167
microsud
closed
3 years ago
0
heatmap
#166
najibveto
closed
3 years ago
8
minor cleaning
#165
microsud
closed
3 years ago
0
Devel
#164
microsud
closed
3 years ago
0
resave data
#163
microsud
closed
3 years ago
0
fixes
#162
microsud
closed
3 years ago
0
fix get_group_abundances
#161
microsud
closed
3 years ago
0
get_group_abundances group argument without NULL as default
#160
phauxfiniks
closed
3 years ago
1
Devel
#159
microsud
closed
3 years ago
0
action test
#158
microsud
closed
3 years ago
0
Merge pull request #156 from microsud/master
#157
microsud
closed
3 years ago
0
Merge pull request #155 from microsud/devel
#156
microsud
closed
3 years ago
0
Merge pull request #154 from microsud/master
#155
microsud
closed
3 years ago
0
even
#154
microsud
closed
3 years ago
0
up
#153
microsud
closed
3 years ago
0
ts viz
#152
microsud
closed
3 years ago
0
Update readme and website
#151
microsud
closed
3 years ago
1
Plotting of paired abundance of multiple taxa
#150
microsud
closed
3 years ago
0
Compare beta diversity between and within groups
#149
microsud
opened
3 years ago
3
cosmetic
#148
microsud
closed
4 years ago
0
faster rarecurve
#147
microsud
closed
4 years ago
0
up
#146
microsud
closed
4 years ago
0
alpha rarefy added
#145
microsud
closed
4 years ago
0
v1.00.06 remove ggtern
#144
microsud
closed
4 years ago
0
new funs added
#143
microsud
closed
4 years ago
0
Devel
#142
microsud
closed
4 years ago
0
Devel
#141
microsud
closed
4 years ago
0
vignette fix
#140
microsud
closed
4 years ago
0
fix bugs
#139
microsud
closed
4 years ago
0
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