Create best estimate of compositional difference between fecal and inoculum specimens

mikemc / vivo-vitro

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Create best estimate of compositional difference between fecal and inoculum specimens #13

Closed mikemc closed 3 years ago

mikemc commented 3 years ago

Needed for #12 and also will be helpful for interpreting and writing our results. Can now create an estimate using the measurements from all four sequencing centers. Best might be to use fido, but can also try complm for a quick estimate and/or sanity check.

mikemc commented 3 years ago

I settled for a "good enough" estimate to determine the mock mixing volumes (02f2eabb56e361bb368b147c3735d05c0ebf8b51). May revisit this analysis in the future for the manuscript.