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mildpiggy / DEP2

An r package for proteomics data Analysis, developed from DEP.
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Continuous covariates? #15

Open m-pauper opened 4 months ago

m-pauper commented 4 months ago

Hello, thanks for the new DEP2 package!

Am I correct in that at the moment it is not possible to add a continuous covariate in the design_formula? Could you explain how I could achieve that?

Thank you!

mildpiggy commented 2 months ago

DEP2 was not design for multiple factors. One alternative way is to combine codition with covariate，and use the advanced_contrast in test_diff. But such way will ignore the continuity of covariates.