Refactor - Githubissues

milkschen / chaintools

Utilities for the genomic chain format

MIT License

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Refactor #6

Closed milkschen closed 2 years ago

milkschen commented 2 years ago

Use generator-based chain parser for to_bed.py, to_sam.py, and to_vcf.py
Reuse core CIGAR-related functions for to_paf and to_sam
Add some tests