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millanek / Dsuite

Fast calculation of Patterson's D (ABBA-BABA) and the f4-ratio statistics across many populations/species
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Dsuite Dtrios creates no output files when --out-prefix points to a non-existing directory #64

Closed feilchenfeldt closed 1 year ago

feilchenfeldt commented 1 year ago

Hi Milan,

I think the following would be very quick to fix:

Current behaviour: When Dsuite Dtrios is run using --out-prefix a/test but the directory a does not exist, then Dsuite runs normally without any error message, but it just does not produce the output files.

Expected behaviour: Either: Check in the beginning whether the directories used in --out-prefix exist and throw an error if not. Or: Create the directories.

Thanks, Hannes

millanek commented 1 year ago

Hi Hannes Sure, I did this today ;). Please do test and let me know.

Milan