Open almamelisa opened 1 year ago
Hi almamelisa
As for the first issue, the names in the tree and the SETS.txt files which you linked are not the same. The tree should be for example like (((Species1,Species),Species3),Outgroup);
As for the second issue, I see that Dsuite took xxx as a species name. This is strange and should not happen. Can you try to delete the line break behind xxx? You have an empty line 9 in the SETS.txt file, probably this is the reason.
All the best Milan
Hi!!
I tried to run the Dtrio instruction followed the tutorial of Analysis of Introgression with SNP Data, with this tree and this SET. However I get the next error:
However, the names of the tree and the sets.txt are the same.
Also, I tried to get the same anlysis but without a tree and with the same sets species, and I got results, but it seems like the program assigned 4 species instead of three, but I don't know if it's like that, or I'm misinterpreting it, here the output .txt and the output message:
Thanks in advance!!
Melisa