Closed kexinhuang12345 closed 2 months ago
Hi @kexinhuang12345 looks great! Can you reformat the code to pass the linter. Instructions for doing this easily are
yapf --style=google -r -d tdc
yapf --style=google <file_path> | pbcopy
or simply copy the output of the yapf commandYou have 3 failing files. If you do the above for all 3 that test should pass.
@kexinhuang12345 lgtm
here is an initial PR for adding scperturb datasets - here are the demo code:
here are the dataset supported "scperturb_gene_NormanWeissman2019"/ "scperturb_gene_ReplogleWeissman2022_rpe1"/ "scperturb_gene_ReplogleWeissman2022_k562_essential"
this also supports the existing drug perturbation datasets