felixdittrich92
commented
1 month ago Hi @mamsterla :wave:,
Thanks for reporting. Unfortunately i wasn't able to reproduce your issue :/
cd api
make runINFO: Will watch for changes in these directories: ['/app']
INFO: Uvicorn running on http://0.0.0.0:8080 (Press CTRL+C to quit)
INFO: Started reloader process [1] using WatchFiles
2024-08-05 07:28:19.085788: I tensorflow/core/util/port.cc:113] oneDNN custom operations are on. You may see slightly different numerical results due to floating-point round-off errors from different computation orders. To turn them off, set the environment variable `TF_ENABLE_ONEDNN_OPTS=0`.
2024-08-05 07:28:19.086951: I external/local_tsl/tsl/cuda/cudart_stub.cc:31] Could not find cuda drivers on your machine, GPU will not be used.
2024-08-05 07:28:19.103180: E external/local_xla/xla/stream_executor/cuda/cuda_dnn.cc:9261] Unable to register cuDNN factory: Attempting to register factory for plugin cuDNN when one has already been registered
2024-08-05 07:28:19.103199: E external/local_xla/xla/stream_executor/cuda/cuda_fft.cc:607] Unable to register cuFFT factory: Attempting to register factory for plugin cuFFT when one has already been registered
2024-08-05 07:28:19.103729: E external/local_xla/xla/stream_executor/cuda/cuda_blas.cc:1515] Unable to register cuBLAS factory: Attempting to register factory for plugin cuBLAS when one has already been registered
2024-08-05 07:28:19.106522: I external/local_tsl/tsl/cuda/cudart_stub.cc:31] Could not find cuda drivers on your machine, GPU will not be used.
2024-08-05 07:28:19.106658: I tensorflow/core/platform/cpu_feature_guard.cc:182] This TensorFlow binary is optimized to use available CPU instructions in performance-critical operations.
To enable the following instructions: AVX2 AVX_VNNI FMA, in other operations, rebuild TensorFlow with the appropriate compiler flags.
2024-08-05 07:28:19.470437: W tensorflow/compiler/tf2tensorrt/utils/py_utils.cc:38] TF-TRT Warning: Could not find TensorRT
INFO: Started server process [8]
INFO: Waiting for application startup.
INFO: Application startup complete.
INFO: 172.18.0.1:57114 - "GET / HTTP/1.1" 404 Not Found
INFO: 172.18.0.1:57114 - "GET /favicon.ico HTTP/1.1" 404 Not Found
INFO: 172.18.0.1:57114 - "GET /docs HTTP/1.1" 200 OK
/usr/local/lib/python3.9/site-packages/pydantic/json_schema.py:2179: PydanticJsonSchemaWarning: Default value [File(PydanticUndefined)] is not JSON serializable; excluding default from JSON schema [non-serializable-default]
warnings.warn(message, PydanticJsonSchemaWarning)
INFO: 172.18.0.1:57114 - "GET /openapi.json HTTP/1.1" 200 OK
mamsterla
mmroden
Bug description
I do a git clone of of the repo and then cd in the api directory and then type 'make run' - I get the following output. I have tried many ways to define HDF5_DIR which do not seem to pass through to the build process:
.....
54.26 running build_ext 54.26 Building h5py requires pkg-config unless the HDF5 path is explicitly specified using the environment variable HDF5_DIR. For more information and details, see https://docs.h5py.org/en/stable/build.html#custom-installation 54.26 error: pkg-config probably not installed: FileNotFoundError(2, 'No such file or directory') 54.26 [end of output] 54.26
54.26 note: This error originates from a subprocess, and is likely not a problem with pip. 54.26 ERROR: Failed building wheel for h5py 54.26 Building wheel for langdetect (setup.py): started 54.56 Building wheel for langdetect (setup.py): finished with status 'done' 54.56 Created wheel for langdetect: filename=langdetect-1.0.9-py3-none-any.whl size=993222 sha256=50e7a1af9ba0ef70e13edfcfc87566758157cf2f97746d1707b9bb01bb286397 54.56 Stored in directory: /root/.cache/pip/wheels/d1/c1/d9/7e068de779d863bc8f8fc9467d85e25cfe47fa5051fff1a1bb 54.57 Building wheel for python-doctr (pyproject.toml): started 54.78 Building wheel for python-doctr (pyproject.toml): finished with status 'done' 54.78 Created wheel for python-doctr: filename=python_doctr-0.9.0a0-py3-none-any.whl size=299068 sha256=80c9749bc081db15f718107d6df35d9c5f6f946fd85f7777b2b506d0be77bef3 54.78 Stored in directory: /root/.cache/pip/wheels/4a/b6/9f/1a0c3bf05bcc97eec54dbf7529ae100ea6e1dbff8a74675bd9 54.78 Successfully built langdetect python-doctr 54.78 Failed to build h5py 54.78 ERROR: ERROR: Failed to build installable wheels for some pyproject.toml based projects (h5py)
failed to solve: process "/bin/sh -c pip install --upgrade pip setuptools wheel && make lock && pip install -r /app/requirements.txt && pip cache purge && rm -rf /root/.cache/pip" did not complete successfully: exit code: 1 make: *** [run] Error 17
Code snippet to reproduce the bug
cd api; make run
Error traceback
Michaels-MacBook-Pro:api mamsterla$ make run docker compose up -d --build WARN[0000] /Users/mamsterla/projects/doctr/api/docker-compose.yml: the attribute
versionis obsolete, it will be ignored, please remove it to avoid potential confusion [+] Building 55.9s (10/11) docker:desktop-linux => [web internal] load build definition from Dockerfile 0.0s => => transferring dockerfile: 672B 0.0s => [web internal] load metadata for docker.io/tiangolo/uvicorn-gunicorn-fastapi:python3.9-slim 0.4s => [web internal] load .dockerignore 0.0s => => transferring context: 2B 0.0s => [web 1/7] FROM docker.io/tiangolo/uvicorn-gunicorn-fastapi:python3.9-slim@sha256:4b52dafa4cf3560a06e8744adae01d1a2cbac771af2f 0.0s => [web internal] load build context 0.0s => => transferring context: 442B 0.0s => CACHED [web 2/7] WORKDIR /app 0.0s => CACHED [web 3/7] RUN apt-get update && apt-get install --no-install-recommends git ffmpeg libsm6 libxext6 make -y && 0.0s => CACHED [web 4/7] COPY pyproject.toml /app/pyproject.toml 0.0s => CACHED [web 5/7] COPY Makefile /app/Makefile 0.0s => ERROR [web 6/7] RUN pip install --upgrade pip setuptools wheel && make lock && pip install -r /app/requirements.txt 55.4sEnvironment
MacBook Pro M1 - Sonoma 14.5 Pyenv installed - configured with Python 3.10.14
Deep Learning backend
N/A