miracum / fhir-gateway

A thin layer between FHIR REST clients and resource processing pipelines.
Apache License 2.0
12 stars 7 forks source link

chore(deps): update all non-major dependencies #59

Closed renovate[bot] closed 1 year ago

renovate[bot] commented 1 year ago

Mend Renovate

This PR contains the following updates:

Package Type Update Change Age Adoption Passing Confidence
docker.io/curlimages/curl minor 7.87.0 -> 7.88.1 age adoption passing confidence
docker.io/hapiproject/hapi minor v6.2.2 -> v6.4.0 age adoption passing confidence
docker.io/library/gradle stage patch 7.6.0-jdk17 -> 7.6.1-jdk17 age adoption passing confidence
docker.io/library/postgres minor 15.1 -> 15.2 age adoption passing confidence
docker.io/vectorized/redpanda patch v22.3.9 -> v22.3.13 age adoption passing confidence
ghcr.io/miracum/fhir-gateway patch v3.10.6 -> v3.10.7 age adoption passing confidence
ghcr.io/miracum/fhir-pseudonymizer minor v2.15.1 -> v2.17.0 age adoption passing confidence
gradle (source) patch 7.6 -> 7.6.1 age adoption passing confidence
harbor.miracum.org/miracum-etl/loinc-conversion patch v1.13.4 -> v1.13.5 age adoption passing confidence
jaegertracing/all-in-one minor 1.41 -> 1.42 age adoption passing confidence
org.postgresql:postgresql (source) dependencies patch 42.5.1 -> 42.5.4 age adoption passing confidence
net.logstash.logback:logstash-logback-encoder dependencies minor 7.2 -> 7.3 age adoption passing confidence
io.micrometer:micrometer-core dependencies patch 1.10.2 -> 1.10.4 age adoption passing confidence
io.micrometer:micrometer-registry-prometheus dependencies patch 1.10.2 -> 1.10.4 age adoption passing confidence
ca.uhn.hapi.fhir:hapi-fhir-client-okhttp (source) dependencies minor 6.2.3 -> 6.4.2 age adoption passing confidence
ca.uhn.hapi.fhir:hapi-fhir-structures-r4 (source) dependencies minor 6.2.3 -> 6.4.2 age adoption passing confidence
ca.uhn.hapi.fhir:hapi-fhir-client (source) dependencies minor 6.2.3 -> 6.4.2 age adoption passing confidence
ca.uhn.hapi.fhir:hapi-fhir-base (source) dependencies minor 6.2.3 -> 6.4.2 age adoption passing confidence
org.springframework.cloud:spring-cloud-dependencies (source) dependencies patch 2021.0.5 -> 2021.0.6 age adoption passing confidence
com.diffplug.spotless plugin minor 6.12.1 -> 6.16.0 age adoption passing confidence
org.springframework.boot plugin patch 2.7.7 -> 2.7.9 age adoption passing confidence

⚠ Dependency Lookup Warnings ⚠

Warnings were logged while processing this repo. Please check the logs for more information.


Release Notes

hapifhir/hapi-fhir-jpaserver-starter ### [`v6.4.0`](https://togithub.com/hapifhir/hapi-fhir-jpaserver-starter/compare/v6.2.2...v6.4.0) [Compare Source](https://togithub.com/hapifhir/hapi-fhir-jpaserver-starter/compare/v6.2.2...v6.4.0)
miracum/fhir-gateway ### [`v3.10.7`](https://togithub.com/miracum/fhir-gateway/releases/tag/v3.10.7) [Compare Source](https://togithub.com/miracum/fhir-gateway/compare/v3.10.6...v3.10.7) ##### Bug Fixes - **ci:** fixed semantic release config ([24486e5](https://togithub.com/miracum/fhir-gateway/commit/24486e5a34b83437029cda4648304d41bfbfca62)) ##### Documentation - added LICENSE file ([6024cc5](https://togithub.com/miracum/fhir-gateway/commit/6024cc526acc92697e36616e5199d7d56c78349c)) ##### Miscellaneous Chores - **deps:** group dependency updates and repository maintenance ([#​62](https://togithub.com/miracum/fhir-gateway/issues/62)) ([09d493d](https://togithub.com/miracum/fhir-gateway/commit/09d493de3007ec3d4359a39d5d5ffc76fe4b33cc)) - fixed CI, added SECURITY.md, merged dep updates ([#​64](https://togithub.com/miracum/fhir-gateway/issues/64)) ([6185aec](https://togithub.com/miracum/fhir-gateway/commit/6185aec778b330b0770593e48825028bd8da3968))
miracum/fhir-pseudonymizer ### [`v2.17.0`](https://togithub.com/miracum/fhir-pseudonymizer/releases/tag/v2.17.0) [Compare Source](https://togithub.com/miracum/fhir-pseudonymizer/compare/v2.16.0...v2.17.0) ##### Features - add crypto hashing support for uri reference nodes ([#​76](https://togithub.com/miracum/fhir-pseudonymizer/issues/76)) ([0e6d17c](https://togithub.com/miracum/fhir-pseudonymizer/commit/0e6d17c2bf5492da6817f6015c09d583c9b9967c)) ### [`v2.16.0`](https://togithub.com/miracum/fhir-pseudonymizer/releases/tag/v2.16.0) [Compare Source](https://togithub.com/miracum/fhir-pseudonymizer/compare/v2.15.1...v2.16.0) ##### Features - support anonymization/pseudonymization for conditional references ([#​51](https://togithub.com/miracum/fhir-pseudonymizer/issues/51)) ([a0d78d6](https://togithub.com/miracum/fhir-pseudonymizer/commit/a0d78d6a1eb2171d2cf764553c268d22ebfe8a2c)) ##### CI/CD - no longer push to harbor.miracum.org or quay.io ([#​73](https://togithub.com/miracum/fhir-pseudonymizer/issues/73)) ([3932ec3](https://togithub.com/miracum/fhir-pseudonymizer/commit/3932ec3efd6bc744571d97ca6c42f9b96adb5394))
gradle/gradle ### [`v7.6.1`](https://togithub.com/gradle/gradle/releases/tag/v7.6.1): 7.6.1 This is a patch release for 7.6. We recommend using 7.6.1 instead of 7.6. It fixes the following issues: - [#​19065](https://togithub.com/gradle/gradle/issues/19065) Platform dependencies not possible in dependency block of test suite plugin - [#​22688](https://togithub.com/gradle/gradle/issues/22688) Increased memory usage (with -p option) - [#​22796](https://togithub.com/gradle/gradle/issues/22796) Building gradle itself fails during toolchain download: permission denied copying a file within `.gradle/jdks` - [#​22875](https://togithub.com/gradle/gradle/issues/22875) Regression with 7.6: @​​pom artifact in JVM library project is no longer found - [#​22937](https://togithub.com/gradle/gradle/issues/22937) Remove safe credentials reference - [#​22973](https://togithub.com/gradle/gradle/issues/22973) Kotlin MPP plugin broken with Gradle 7.6 due to signature change in TestResultProcessor - [#​23016](https://togithub.com/gradle/gradle/issues/23016) toolchainManagement.jvm.javaRepositories should not expose the full surface of NamedDomainObjectList - [#​23025](https://togithub.com/gradle/gradle/issues/23025) Back-port toolchain related fixes to 7.6.1 - [#​23053](https://togithub.com/gradle/gradle/issues/23053) Auto-provisioning/auto-detection of IBM Semeru toolchains is broken with Gradle 7.6 - [#​23074](https://togithub.com/gradle/gradle/issues/23074) Docs: Build Lifecycle starts halfway through a point - [#​23096](https://togithub.com/gradle/gradle/issues/23096) Classifiers of version catalog are discarded while copied to anothor dependency - [#​23111](https://togithub.com/gradle/gradle/issues/23111) Ant closures are broken with Gradle 7.6 - [#​23178](https://togithub.com/gradle/gradle/issues/23178) Mention the Foojay Toolchain Resolver plugin in the Gradle manual - [#​23215](https://togithub.com/gradle/gradle/issues/23215) Gradle 7.6: high memory usage (android project) - [#​23224](https://togithub.com/gradle/gradle/issues/23224) Backport to 7.6.1 "Fix for Incremental compilation with modules" - [#​23294](https://togithub.com/gradle/gradle/issues/23294) "Unable to make progress running work" together with --continue and failing tasks (Backport to 7.6.1) - [#​23555](https://togithub.com/gradle/gradle/issues/23555) Improve Toolchain related deprecation nagging in 7.6 - [#​23894](https://togithub.com/gradle/gradle/issues/23894) Update EOL policy - [#​23910](https://togithub.com/gradle/gradle/issues/23910) Backport trusting only full GPG keys in dependency verification \[Backport 7.6.1] - [#​23941](https://togithub.com/gradle/gradle/issues/23941) Typo in v7.6 docs about disabling_the_daemon - [#​23985](https://togithub.com/gradle/gradle/issues/23985) Resolving of manually created configuration creates a ResolveException [Read the Release Notes](https://docs.gradle.org/7.6.1/release-notes.html) #### Upgrade Instructions Switch your build to use Gradle 7.6.1 by updating your wrapper: ./gradlew wrapper --gradle-version=7.6.1 See the [Gradle 7.x upgrade guide](https://docs.gradle.org/7.6.1/userguide/upgrading_version\_7.html#changes\_7.6) to learn about deprecations, breaking changes and other considerations when upgrading to Gradle 7.6.1. #### Reporting Problems If you find a problem with this release, please file a bug on [GitHub Issues](https://togithub.com/gradle/gradle/issues) adhering to our issue guidelines. If you're not sure you're encountering a bug, please use the [forum](https://discuss.gradle.org/c/help-discuss).
pgjdbc/pgjdbc ### [`v42.5.4`](https://togithub.com/pgjdbc/pgjdbc/blob/HEAD/CHANGELOG.md#​4254-2023-02-15-102104--0500) ##### Fixed fix: fix testGetSQLTypeQueryCache by searching for xid type. We used to search for box type but it is now cached. xid is not cached, this nuance is required for the test. fix OidValueCorrectnessTest BOX_ARRAY OID, by adding BOX_ARRAY to the oidTypeName map \[PR [#​2810](https://togithub.com/pgjdbc/pgjdbc/issues/2810)]\([https://github.com/pgjdbc/pgjdbc/pull/2810](https://togithub.com/pgjdbc/pgjdbc/pull/2810)0). fixes [Issue #​2804](https://togithub.com/pgjdbc/pgjdbc/issues/2804). fix: Make sure that github CI runs tests on all(https://togithub.com/pgjdbc/pgjdbc/pull/2809)dbc/pgjdbc/pull/2809\)). ### [`v42.5.3`](https://togithub.com/pgjdbc/pgjdbc/blob/HEAD/CHANGELOG.md#​4253-2023-02-03-082450--0500) ##### Fixed fix: Add box to TypeInfoCache, fixes [Issue #​2746](https://togithub.com/pgjdbc/pgjdbc/issues/2746) [PR #​2747](https://togithub.com/pgjdbc/pgjdbc/pull/2747) fix: regression in PgResultSet LONG_MIN copy and paste error fixes [Issue #​2748](https://togithub.com/pgjdbc/pgjdbc/issues/2748) [PR#​2749](https://togithub.com/pgjdbc/pgjdbc/pull/2749) ### [`v42.5.2`](https://togithub.com/pgjdbc/pgjdbc/blob/HEAD/CHANGELOG.md#​4252-2023-01-31-143046--0500) ##### Changed regression: This release has 2 known regressions which make it unusable see the notes above. We advise people to use 42.5.3 instead. docs: specify that timeouts are in seconds and there is a maximum. Housekeeping on some tests fixes [#Issue 2671](https://togithub.com/pgjdbc/pgjdbc/issues/2671) [PR #​2686](https://togithub.com/pgjdbc/pgjdbc/pull/2686) docs: clarify binaryTransfer and add it to README [PR# 2698](https://togithub.com/pgjdbc/pgjdbc/pull/2698) docs: Document the need to encode reserved characters in the connection URL [PR #​2700](https://togithub.com/pgjdbc/pgjdbc/pull/2700) feat: Define binary transfer for custom types dynamically/automatically fixes [Issue #​2554](https://togithub.com/pgjdbc/pgjdbc/issues/2554) [PR #​2556](https://togithub.com/pgjdbc/pgjdbc/pull/2556) ##### Added fix: added gssResponseTimeout as part of [PR #​2687](https://togithub.com/pgjdbc/pgjdbc/pull/2687) to make sure we don't wait forever on a GSS RESPONSE ##### Fixed fix: Ensure case of XML tags in Maven snippet is correct [PR #​2682](https://togithub.com/pgjdbc/pgjdbc/pull/2682) fix: Make sure socket is closed if an exception is thrown in createSocket fixes [Issue #​2684](https://togithub.com/pgjdbc/pgjdbc/issues/2684) [PR #​2685](https://togithub.com/pgjdbc/pgjdbc/pull/2685) fix: Apply patch from [Issue #​2683](https://togithub.com/pgjdbc/pgjdbc/issues/2683) to fix hanging ssl connections [PR #​2687](https://togithub.com/pgjdbc/pgjdbc/pull/2687) fix - binary conversion of (very) long numeric values (longer than 4 \* 2^15 digits) [PR #​2697](https://togithub.com/pgjdbc/pgjdbc/pull/2697) fixes [Issue #​2695](https://togithub.com/pgjdbc/pgjdbc/issues/2695) minor: enhance readability connection of startup params [PR #​2705](https://togithub.com/pgjdbc/pgjdbc/pull/2785)
micrometer-metrics/micrometer ### [`v1.10.4`](https://togithub.com/micrometer-metrics/micrometer/releases/tag/v1.10.4): 1.10.4 ##### :star: New Features / Enhancements - Use Meter.Id for logging in DynatraceExporterV2 [#​3616](https://togithub.com/micrometer-metrics/micrometer/pull/3616) ##### :lady_beetle: Bug Fixes - Fixing Scope setting and resetting via ObservationThreadLocalAccessor [#​3613](https://togithub.com/micrometer-metrics/micrometer/pull/3613) - ObservationThreadLocalAccessor fixes [#​3603](https://togithub.com/micrometer-metrics/micrometer/pull/3603) - LogbackMetrics does not protect against StackOverflowError in arbitrary Counter implementations [#​3623](https://togithub.com/micrometer-metrics/micrometer/issues/3623) - \[Dynatrace v2] Ensure synchronization when taking snapshots [#​3615](https://togithub.com/micrometer-metrics/micrometer/pull/3615) - Statsd UDS protocol does not work on linux ARM64 [#​3605](https://togithub.com/micrometer-metrics/micrometer/pull/3605) - Hazelcast Cache Metrics, "put" operation count incorrect [#​3556](https://togithub.com/micrometer-metrics/micrometer/issues/3556) ##### :hammer: Dependency Upgrades - Upgrade netty to 4.1.89 [#​3642](https://togithub.com/micrometer-metrics/micrometer/issues/3642) - Upgrade context-propagation to 1.0.2 [#​3638](https://togithub.com/micrometer-metrics/micrometer/issues/3638) - Upgrade Testcontainers to 1.17.6 [#​3641](https://togithub.com/micrometer-metrics/micrometer/issues/3641) - Upgrade JUnit to 5.9.2, AssertJ to 3.24.2, Mockito to 4.11.0, Archunit to 1.0.1 [#​3640](https://togithub.com/micrometer-metrics/micrometer/issues/3640) - Upgrade Dropwizard Metrics to 4.2.16 [#​3639](https://togithub.com/micrometer-metrics/micrometer/issues/3639) - Upgrade to wavefront-sdk-java 3.0.4 [#​3636](https://togithub.com/micrometer-metrics/micrometer/issues/3636) - Upgrade to reactor-bom 2020.0.27 [#​3634](https://togithub.com/micrometer-metrics/micrometer/issues/3634) - Upgrade signalfx-java to 1.0.28 [#​3633](https://togithub.com/micrometer-metrics/micrometer/issues/3633) - Update aws-java-sdk-cloudwatch to 1.12.405 [#​3632](https://togithub.com/micrometer-metrics/micrometer/issues/3632) - Bump com.gradle.enterprise from 3.12.2 to 3.12.3 [#​3609](https://togithub.com/micrometer-metrics/micrometer/pull/3609) - Update Elasticsearch Docker image versions to the latest in integration tests [#​3595](https://togithub.com/micrometer-metrics/micrometer/pull/3595) - Update samples to use Spring Boot 2.7.8 [#​3593](https://togithub.com/micrometer-metrics/micrometer/pull/3593) ##### :memo: Tasks - Remove snapshot repository for 1.10.4 [#​3637](https://togithub.com/micrometer-metrics/micrometer/issues/3637) - Fix deprecation warnings from Spotless [#​3630](https://togithub.com/micrometer-metrics/micrometer/pull/3630) - Revert Java to 18 on CircleCI for 1.10.x and above [#​3612](https://togithub.com/micrometer-metrics/micrometer/issues/3612) - Set dependabot target-branch to 1.9.x [#​3610](https://togithub.com/micrometer-metrics/micrometer/issues/3610) - Clean up compile warnings in micrometer-core [#​3604](https://togithub.com/micrometer-metrics/micrometer/pull/3604) - Add circleci config file to the circleci cache key [#​3611](https://togithub.com/micrometer-metrics/micrometer/issues/3611) - Add tests for OtlpConfig.resourceAttributes() [#​3608](https://togithub.com/micrometer-metrics/micrometer/pull/3608) - \[Dynatrace registry v1] Use header instead of query parameter [#​3596](https://togithub.com/micrometer-metrics/micrometer/pull/3596) - Remove broken link in StackdriverSample [#​3591](https://togithub.com/micrometer-metrics/micrometer/pull/3591) - Update CircleCI images to the latest [#​3550](https://togithub.com/micrometer-metrics/micrometer/pull/3550) ##### :heart: Contributors Thank you to all the contributors who worked on this release: [@​izeye](https://togithub.com/izeye), [@​pirgeo](https://togithub.com/pirgeo), and [@​taer](https://togithub.com/taer) ### [`v1.10.3`](https://togithub.com/micrometer-metrics/micrometer/releases/tag/v1.10.3): 1.10.3 ##### :lady_beetle: Bug Fixes - system.cpu.usage does not work in a native image [#​3578](https://togithub.com/micrometer-metrics/micrometer/issues/3578) - \[Dynatrace] Log NaNs at DEBUG instead of WARNING [#​3557](https://togithub.com/micrometer-metrics/micrometer/pull/3557) ##### :hammer: Dependency Upgrades - Upgrade to Spotless plugin 6.12.1 [#​3589](https://togithub.com/micrometer-metrics/micrometer/issues/3589) - Upgrade to Spotless Gradle Plugin 6.12.0 [#​3568](https://togithub.com/micrometer-metrics/micrometer/pull/3568) - Upgrade to Reactor 2020.0.26, Reactor Netty 1.0.26, Netty 4.1.86 [#​3588](https://togithub.com/micrometer-metrics/micrometer/issues/3588) - Upgrade to signalfx-java 1.0.27 [#​3587](https://togithub.com/micrometer-metrics/micrometer/issues/3587) - Upgrade to Dropwizard Metrics 4.1.35 [#​3586](https://togithub.com/micrometer-metrics/micrometer/issues/3586) - Upgrade to AWS Cloudwatch SDK 2.18.41 [#​3585](https://togithub.com/micrometer-metrics/micrometer/issues/3585) - Upgrade to aws-java-sdk-cloudwatch 1.12.381 [#​3584](https://togithub.com/micrometer-metrics/micrometer/issues/3584) - Upgrade to io.spring.ge.conventions 0.0.13 [#​3579](https://togithub.com/micrometer-metrics/micrometer/pull/3579) - Bump com.gradle.enterprise from 3.12 to 3.12.1 [#​3572](https://togithub.com/micrometer-metrics/micrometer/pull/3572) - Upgrade to Gradle Enterprise Gradle Plugin 3.12 [#​3566](https://togithub.com/micrometer-metrics/micrometer/pull/3566) ##### :heart: Contributors Thank you to all the contributors who worked on this release: [@​izeye](https://togithub.com/izeye), [@​pirgeo](https://togithub.com/pirgeo)
hapifhir/hapi-fhir ### [`v6.4.1`](https://togithub.com/hapifhir/hapi-fhir/releases/tag/v6.4.1) 6.4.1 ### [`v6.4.0`](https://togithub.com/hapifhir/hapi-fhir/releases/tag/v6.4.0) 6.4.0 ### [`v6.2.5`](https://togithub.com/hapifhir/hapi-fhir/releases/tag/v6.2.5) 6.2.5 ### [`v6.2.4`](https://togithub.com/hapifhir/hapi-fhir/releases/tag/v6.2.4) 6.2.4
spring-cloud/spring-cloud-release ### [`v2021.0.6`](https://togithub.com/spring-cloud/spring-cloud-release/compare/v2021.0.5...v2021.0.6) [Compare Source](https://togithub.com/spring-cloud/spring-cloud-release/compare/v2021.0.5...v2021.0.6)

Configuration

πŸ“… Schedule: Branch creation - "before 3am on the first day of the month" (UTC), Automerge - At any time (no schedule defined).

🚦 Automerge: Disabled by config. Please merge this manually once you are satisfied.

β™» Rebasing: Whenever PR becomes conflicted, or you tick the rebase/retry checkbox.

πŸ‘» Immortal: This PR will be recreated if closed unmerged. Get config help if that's undesired.



This PR has been generated by Mend Renovate. View repository job log here.

github-actions[bot] commented 1 year ago

πŸ¦™ MegaLinter status: βœ… SUCCESS

Descriptor Linter Files Fixed Errors Elapsed time
βœ… DOCKERFILE hadolint 1 0 0.4s
βœ… EDITORCONFIG editorconfig-checker 6 0 0.03s
βœ… GROOVY npm-groovy-lint 1 0 8.79s
βœ… REPOSITORY checkov yes no 11.51s
βœ… REPOSITORY gitleaks yes no 0.91s
βœ… REPOSITORY git_diff yes no 0.01s
βœ… REPOSITORY secretlint yes no 1.27s
βœ… REPOSITORY syft yes no 0.6s
βœ… REPOSITORY trivy yes no 4.02s
βœ… YAML prettier 3 0 0.45s
βœ… YAML v8r 3 0 2.76s
βœ… YAML yamllint 3 0 0.29s

See detailed report in MegaLinter reports _Set VALIDATE_ALL_CODEBASE: true in mega-linter.yml to validate all sources, not only the diff_

_MegaLinter is graciously provided by OX Security_

miracum-bot commented 1 year ago

:tada: This PR is included in version 3.10.9 :tada:

The release is available on GitHub release

Your semantic-release bot :package::rocket: