Support for notebook - automatic cleanup + support for the large file - https://git-lfs.github.com/

[miranov25]

Jupyter as an precommit: https://zhauniarovich.com/post/2020/2020-06-clearing-jupyter-output/

Steps:

• install precommit pip install pre-commit
• add the yaml for precommit git commit .pre-commit-config.yaml -m "#30 - adding automatic precommit"
• install the pre-commit in hooks

  (venv3) miranov@miranov-Strix-17-GL703GE:~/github/fastMCKalman$ pre-commit install
  pre-commit installed at .git/hooks/pre-commit

[miranov25]

pip install pre-commit has to be added to the requirement

it is not done by default

[miranov25]

Using filters not needs anything - https://gist.github.com/33eyes/431e3d432f73371509d176d0dfb95b6e

git config --global filter.strip-notebook-output.clean 'jupyter nbconvert --ClearOutputPreprocessor.enabled=True --to=notebook --stdin --stdout --log-level=ERROR'

[miranov25]

git precommit hook did not work as it used hardwired path the the precommit software to be removed

[miranov25]

filter writes it to the $HOME/.gitconfig [filter "strip-notebook-output"] clean = jupyter nbconvert --ClearOutputPreprocessor.enabled=True --to=notebook --stdin --stdout --log-level=ERROR

[miranov25]

lsf in combination with filter makes files impossible to remove

[miranov25]

To fix the problem I had to git clean -fdx