fastq.gz input not recognized

[Ros85]

When trying to launch MToolBox with a fastq.gz input file, and specifying this input type in the config.sh, the program returns an error saying "Input format not recognized".

[clody23]

Hi Rosanna,

fastq.gz file is not a supported argument of the pipeline, although it is able to read from gzipped files. You should still use input_type=fastq with fastq gzipped files.

Best, C